Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso13g1240 ATGGATCCAGAAACAGAACAAGGCTCAGAATTCTCAATCGAATTGCAATCGAAAGCGTTCCAAGTTCTAAGCTCAAACGACAACACCGCAATGGAAACCCTCTTCTCCCACCTCTTCTACTCTCCTCATTCCGAACAACTCCGATCCCAAGCACTCGAATTCTTTCAATGCTGCAAACACCACCACCCCGATCTTCTCTTCATCAAACTCTTCTTCCTCCTCCGTTCCACTCCTCTCCCCGAAACTCGCGCCAACGCCGCACGCGCCTTGCACCTCCTCAACCCCTCCCACCTCTGGCCCAACCTTAAGCCCATCGCCCAGGCCCACCTCAAGGCCCACTTCCTCAACTTCCTCTCCGACGAACCTTCCCTCCACGTCCTCCGCCTCGCCTCCCATCTCCTCGCTCAAACCGTCTCCGTTATCTTCAAAACTCACCAAACCTGGCCTGAGCTCCTCAATTTTTTACTCTCCTCCATCTCCTCCGATGAAAACAAGCGCCGCGAGGTCGCCGCGCTTGTCTTCGCCAGGCTCCCAAACGACTGCCGTTTTCTCGTCCACAACGCGCTCAGGGACAACAAACGCCTTCTTCACGCGTCGTTTCTGCGCTGCCTCGCGTCGTCCTGCCCCGACGTCCAGGTCGCCGCGTTCGGCGCCGTCGTCAGCTTGATCCCTCTGTTCTCCGAAACTAAGCTCTTCCACGAGCTCCTCCGCGCCCTCATGGTTGGCGTCTTCACGCTCCTGCATGGCCACGAAGGAAGCTACTTCAAAATCGCGTTCGCGGAGTTGATAAATCTGGTTTCTCGCCAGCCGCAGCTTTTGAAACCCTACATGAACGACATGGTTCTCGACGTGCTTCAGATCGCGGAGAGCGGTGGCTTGAGCGACGAAACGCACCGTTTGGCGTTTGAGTTGGTGATGGCCATGGCGGAGGAGAAGGAGTACGAGAACGTCTTCGCTAACCTTCCTTACAGGATTGTGTGCAAGCTGTTCCTTGTTCCGATGAAGATGTTGCAGCGCCTCGCGGAGGACGATGGTGAGCGTGAATTGAAAAACGAGAAGGTTTTTGATGTTTACGAGTTTGGAATGAAGAGCTTGAAGAAGCTTTGCGTTGTGCTCGGAGCGAGTAAAGCCGTGCCTGTTGCGTTTGAAGTGTTTCGGCTTCACTTAGATGATGATGCGGAATATTGGAAGGAGCGCCATGCAGGAATCACAATGCTCAGTGTGATCGCAGAAGAGTTCTCTGATGAAATGGTATTGATGGAAAATTTTCTGGTTGGAGTGGTGACCAAAATTTTGAAGTCAATGCAAGACTCTCATACTCAAGTTCGGTTGGCAACTTTCAAATTTATGGAGACTCCTACAAACTTTGTTCAGGTGGTGCAAATCCTTTACCATCACAGGCTTGTGCATGCTTTTTGCACTGCACTCGACAATGAACAGGTCGTTAAAGTGAAGGAACAAGCTGCCTCAGCAATGCAATTTTTCCTAAAGAACACTTTGCCAGAAAGCTTAACACTAAATAAGACTGCGGAAACTGTATTAGGAAAATTGTTGCCATTGATTCAGGACAAAGATAGTGCCGAGATAAGAGGTATTGCTTTGTCAACTTTAAATATAGTTGCACAACGGTGTCATGAAGTGGCTAACAAGTACTGTGCAATTTATCTTCCCATCTTACTGGAAGCATGCAAGGACTATAATTATTATATCAGAGAGGAGGCAGCACGGGGAATTCGAATTTGTGCAGAGCTTGGAACACAACAGTTGAAGCCTTTTATCAATAGAATATTGTCAGAACTCGGTGTTTTGATGAACAATCCAAGTCCACTGAATGAAAAAGCGCATGATATTGCAGTTTCTGCTCTAGGAAGAATTTGTGAATTCCATCGTGAATGCATTGATGGCTCTCAGATGGTTCCTGCCTGGTTAAGTTTCTTGCCACTTAGAAATGATTTGATTGAAGCCAAACTTATGCATGAACAGCTTTGTTTAATGGCTGAAAGATTTGATAAGGACCTTTTAGGAGCTGATAGTCAAAACTTTATCAAGATTATTGTAGTGCTTCTTGAGATTATTGATAAGAGTGACAAATTAGCTACAGCACAAACAATCCAGCAGGTGGAAAATTTGCTGAGGCAGCTTGGGCGGTGTATTCCACGTAGTGCGTTTGATACAATTTTTTCATCTTTGAATGCCCAGCAAAGGGCATTACTATTGTCTTTGTTATACTCCTAG 2235 0.4756 MDPETEQGSEFSIELQSKAFQVLSSNDNTAMETLFSHLFYSPHSEQLRSQALEFFQCCKHHHPDLLFIKLFFLLRSTPLPETRANAARALHLLNPSHLWPNLKPIAQAHLKAHFLNFLSDEPSLHVLRLASHLLAQTVSVIFKTHQTWPELLNFLLSSISSDENKRREVAALVFARLPNDCRFLVHNALRDNKRLLHASFLRCLASSCPDVQVAAFGAVVSLIPLFSETKLFHELLRALMVGVFTLLHGHEGSYFKIAFAELINLVSRQPQLLKPYMNDMVLDVLQIAESGGLSDETHRLAFELVMAMAEEKEYENVFANLPYRIVCKLFLVPMKMLQRLAEDDGERELKNEKVFDVYEFGMKSLKKLCVVLGASKAVPVAFEVFRLHLDDDAEYWKERHAGITMLSVIAEEFSDEMVLMENFLVGVVTKILKSMQDSHTQVRLATFKFMETPTNFVQVVQILYHHRLVHAFCTALDNEQVVKVKEQAASAMQFFLKNTLPESLTLNKTAETVLGKLLPLIQDKDSAEIRGIALSTLNIVAQRCHEVANKYCAIYLPILLEACKDYNYYIREEAARGIRICAELGTQQLKPFINRILSELGVLMNNPSPLNEKAHDIAVSALGRICEFHRECIDGSQMVPAWLSFLPLRNDLIEAKLMHEQLCLMAERFDKDLLGADSQNFIKIIVVLLEIIDKSDKLATAQTIQQVENLLRQLGRCIPRSAFDTIFSSLNAQQRALLLSLLYS* 745
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso13g1240 744 PANTHER IMPORTIN BETA 21 741 IPR040122 GO:0006606
Gso13g1240 744 Gene3D - 33 506 IPR011989 -
Gso13g1240 744 Gene3D - 508 742 IPR011989 -
Gso13g1240 744 PANTHER BETA-3, PUTATIVE-RELATED 21 741 - -
Gso13g1240 744 SUPERFAMILY ARM repeat 32 724 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso13g1240 Gso-Chr13 27516614 27522124 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso13g1240 K20222 - gmx:102669706 1441.79