Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso13g0612 ATGGGAGTGAGAATAGCCTTTATGGTAGTTTTGTGTGTTTTTCCGGCGATGGTCTCAGCCATACGCCCTCACTTAACCCCTTTCTATGTGAAGGGTCGCGTGTTTTGTGACCCTTGCCGTGCCGGTTTTGAGACTCCTCTAACCACCTACATTGCTGGTGCCGAGGTTACTCTGCAATGCAAGGACAGAATCACGAACAACAATGTGTACAGCAAGCAGGTTAAGACTGATTCAACAGGATCATTTACGATCTTCGTGGACGCGAATCAAGCAAATCAAAATTGTGATGCGAGTCTAGTAACAAGTCCTCTACGTGATTGCAAAGAGCCCACTCCAGGCCGTGACCATACACGTGTTAATCTCAATCGCTTCAATGGCATTGCCACCAATGATAGATTTGTCAACAACTTGGGTTTCATGAAGGAAATTGTTGCATCTAGTTGTGCAAAGATTTTCAAGAGTTACCAAGAGTTAGGTAATGGGAATTAA 489 0.4458 MGVRIAFMVVLCVFPAMVSAIRPHLTPFYVKGRVFCDPCRAGFETPLTTYIAGAEVTLQCKDRITNNNVYSKQVKTDSTGSFTIFVDANQANQNCDASLVTSPLRDCKEPTPGRDHTRVNLNRFNGIATNDRFVNNLGFMKEIVASSCAKIFKSYQELGNGN* 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso13g0612 162 PANTHER PROTEIN DOWNSTREAM OF FLC-RELATED 4 158 IPR006041 -
Gso13g0612 162 Pfam Pollen protein Ole e 1 like 30 112 - -
Gso13g0612 162 PANTHER ALLERGEN-LIKE PROTEIN BRSN20 4 158 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso13g0612 Gso-Chr13 19999303 20000650 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso13g0612 - - gmx:100796594 335.109
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso13g0612 13 19999303 20000650 Gso4g0906 4 9920657 9922149 PCT
Gso13g0612 13 19999303 20000650 Gso6g0891 6 8507409 8509322 PCT
Gso4g0906 4 9920657 9922149 Gso13g0612 13 19999303 20000650 PCT
Gso6g0891 6 8507409 8509322 Gso13g0612 13 19999303 20000650 PCT