Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso13g0607 ATGCTGCTCGGAAAGAGACCTCGTCCTCCAATGAAGAGAACAACAAGCATGTCCGAAATGACCTTGGATCTGAACACAGCCGCCGATGCCGCCGCCGCCGCCGACCAACAGAGATCAGGTGTTGGTCCCTCGGCAGCAGCAGATCAGACTACGAGGATGTTGGCATCACCCAAAATCCTCAGAAGACATTCTTCGTATTTCGGCGACGCGCGTCACTTCCTTCGTGCGTGTTCCCTCTGCAAACGCCCTCTCGTGCCCGGTCGCGACATCTACATGTACAGGGGTGATAGTGCTTTCTGCAGCCTGGAGTGTCGCCAACAGCAGATAAACCAGGACGAGAGAAAGGAGAAGTTTGTCATGGCGTCGAAGAAAAAAGTTGTGGCTCCTCCGCCGTCTGGGTCTCAAGTCGTGGCTACCGCCACCAAGGGTTAA 432 0.5532 MLLGKRPRPPMKRTTSMSEMTLDLNTAADAAAAADQQRSGVGPSAAADQTTRMLASPKILRRHSSYFGDARHFLRACSLCKRPLVPGRDIYMYRGDSAFCSLECRQQQINQDERKEKFVMASKKKVVAPPPSGSQVVATATKG* 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso13g0607 143 Pfam zinc-finger of the FCS-type, C2-C2 69 115 IPR007650 -
Gso13g0607 143 PANTHER FCS-LIKE ZINC FINGER 5 1 130 - -
Gso13g0607 143 MobiDBLite consensus disorder prediction 123 143 - -
Gso13g0607 143 PANTHER FCS-LIKE ZINC FINGER 5 1 130 - -
Gso13g0607 143 ProSiteProfiles Zinc finger FLZ-type profile. 72 116 IPR007650 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso13g0607 Gso-Chr13 19910087 19911178 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso13g0607 - - gmx:100796944 266.929
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g1428 14 44405409 44406512 Gso13g0607 13 19910087 19911178 GST
Gso13g0607 13 19910087 19911178 Gso4g0910 4 9975240 9976339 PCT
Gso13g0607 13 19910087 19911178 Gso6g0892 6 8516076 8517178 PCT
Gso4g0910 4 9975240 9976339 Gso13g0607 13 19910087 19911178 PCT
Gso6g0892 6 8516076 8517178 Gso13g0607 13 19910087 19911178 PCT