Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso13g0219 ATGATAACGGGAGAGGATTTGTACAAGGTGATGTGCGCGATGGTGCCGCTATACTTCGCAATGCTGGTGGCCTACGGTTCAGTCAAGTGGTGCAAGATGTTCACCCCGGACCAGTGCTCCGGCATCAACCGTTTCGTGGCTGTGTTTGCTGTTCCGATTCTCTCCTTCCACTTCATCTCCATGAACAACCCCTACGAGATGGACGCCAAATTCATCGTCGCCGACACGCTATCCAAGCTCGCCGTGCTTCTATTTCTCTCCCTCTGGGCCGTTTTCTTCGCCGGAGGCTCCTTGGATTGGCTCATCACTTTCTTCTCCCTCGCTACCTTGCCCAACACGCTTGTTATGGGCATTCCGCTGCTCCAAGCCATGTACGGCGATTTCACGCAATCGCTCATGGTGCAACTCGTGGTTCTTCAGTGCACCATATGGTACACTTTACTCCTCTTCTTGTTCGAGTACAGAGCCGCGACACTTCTGATCCAACGGCAGTTCCCGGGGCCAACGGCGGCATCCATAGCGAAATTCGACGTCGACGGCGACGTGATATCCCTTGACGGCCACGACATGCCGCTGCGGACGGAGTCGGAGACCGACGACCACGGCCGGATCCACGTGCGGATCCGCCGCTCCGTCTCGTCGGCGCCGGAGACGAACTCCTCCATCGGCGGCAACACCACCGTCGTGACGCCGCGGCAGTCGAACCTCTCCAACGCGGACATATTCTCGATCAACACGCCGCTGCACCTGCACGAAGGCGGCGGCAACCTCGCCGCCGGCGCAAGCCCCCACCTCTCCGGCTACGCCTCCTCCGACGCGTACTCGCTGCAGCCAACGCCGAGGGCCTCGAACTTCAACGAGATGGAGGCCGGCACGCCCGTGTGGGGGAGGTCACCGGTCGCCGCCGGGAGAGTGTGCCGGCAGTCTTCGCCGGTGGCGAGAGTGTTGTGGGAGTCGCCGGGGAAATGCCTGGGAGATAAGAGACAAGGCTGCAAGGACATTACCATGTCAGATAAAGAAATCAGCTTCAGAGACAGCACCAAAGTCCCTATGCCGGGGGAAGCTGCAGAACCCAAAGACACAGTTGCCAATAACCAGAAAATGCCACATGCCTTTGTTATGATTAGGCTTATTCTCGTCGTAGTAGGAAGAAAACTTTCTCGAAACCCTAATACATATTCTAGTGTATTAGGACTTCTTTGGTCTCTAATCTCTTTCAAATGGAATATGGAAATGCCTAGTCTTATCAAAGCATCGGTCAAAATCATCTCAGATGCGGGCCTTGGGATGGCTATGTTTAGCTTAGGGCTTTTCATGGCCCTTCAGCCTCGTATCATAGCTTGCGGTACCAAAAGAGCAGTCATGGGCATGGTCATTCGCTTCATGTGTGGGCCTCTTGTAATGTCTGCTTCTTCAATTGTCATTGGATTAAGACAAGACAGACTTCACACTGCCATTGTACAGGCTGCTCTTCCACAGGGGATAGTGCCATTTATATTTGCAAGGGAATATGGATTGCATCCTGATATTTTGAGCACAGGGGTTATCTTTGGCATGTTAATATCCTTACCAATAACTCTCTTATATTACATATTTCTTGGCTTATGA 1608 0.5354 MITGEDLYKVMCAMVPLYFAMLVAYGSVKWCKMFTPDQCSGINRFVAVFAVPILSFHFISMNNPYEMDAKFIVADTLSKLAVLLFLSLWAVFFAGGSLDWLITFFSLATLPNTLVMGIPLLQAMYGDFTQSLMVQLVVLQCTIWYTLLLFLFEYRAATLLIQRQFPGPTAASIAKFDVDGDVISLDGHDMPLRTESETDDHGRIHVRIRRSVSSAPETNSSIGGNTTVVTPRQSNLSNADIFSINTPLHLHEGGGNLAAGASPHLSGYASSDAYSLQPTPRASNFNEMEAGTPVWGRSPVAAGRVCRQSSPVARVLWESPGKCLGDKRQGCKDITMSDKEISFRDSTKVPMPGEAAEPKDTVANNQKMPHAFVMIRLILVVVGRKLSRNPNTYSSVLGLLWSLISFKWNMEMPSLIKASVKIISDAGLGMAMFSLGLFMALQPRIIACGTKRAVMGMVIRFMCGPLVMSASSIVIGLRQDRLHTAIVQAALPQGIVPFIFAREYGLHPDILSTGVIFGMLISLPITLLYYIFLGL* 536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso13g0219 535 PANTHER AUXIN EFFLUX CARRIER COMPONENT 6 1 535 - -
Gso13g0219 535 Pfam Membrane transport protein 10 530 IPR004776 GO:0016021|GO:0055085
Gso13g0219 535 TIGRFAM 2a69: auxin efflux carrier 1 535 IPR014024 -
Gso13g0219 535 PANTHER AUXIN EFFLUX CARRIER COMPONENT 1B-RELATED 1 535 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso13g0219 Gso-Chr13 11827236 11837740 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso13g0219 1 513 Organic Solute Cotransporters AT1G77110 64.884 0.0 692
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso13g0219 K13947 - gmx:100800139 966.837
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g1292 14 35014373 35028869 Gso13g0219 13 11827236 11837740 GST