Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso13g0193 ATGAAGTCTCTAACGACGCTATGGCCTATGGATATTCTGAAAACCTCTTCTTTTGTTAGAATCACCGCCCTGTCACTCTTCTCCCTCACCCTCTTCCTCTTTCTCTTCACGCGCTTCTCTCCCACCTCTTATTCTTCCCTCACCTTCTTCTCCTCCACGCCGGAGCCACCCTCCCGGGAACAAGCACCACCACCACAACCAAATTCTCCTCCTCCTCCTCCGCCGCCGCCTCCACCGTCTCCTCCGCCGCCGGGAGTGAAAATATTCCGCGTGCCGCCGTTACCGCCGGTGGAGAGGATGGGGGTGTTGGACGGTAACGGCGTGATGACGGAGGATTTCAAGGTGGGGGAATTAGATCCCGGTTTCGAGGAAGATTCGCTAAACGACACCGTTTCGAGCGTTTCGAGTAAGGGGGGTGAGCGTGTGAGGGAGAAGGTTGAGAAGTATAAAACGTGTGATGTGAGAACGGTGGATTATGTGCCGTGTTTGGATAACGTGAAAGCGGTGAAGAAATACAAAGAGAGTTTGAGAGGGGAGAAGTACGAGCGGCATTGCAAAGGGATGGGCCTCAAGTGTCTGGTGCCCCGGCCCAAGGGATATCAGAGGCCCATCCCTTGGCCCAAAAGCCGAGATGAGGTTTGGTACAGTAATGTACCCCATACACGTCTAGTCGAGGATAAAGGTGGTCAAAATTGGATATTAATAAAGAGGGATAAATTTGTTTTTCCTGGTGGTGGAACTCAGTTTATACATGGTGCAGATAAATACCTGGATCAGATTTCTGAGATGGTTCCTGAAATTGCATTTGGTCACAACACCAGAGTTGCTTTAGACGTTGGCTGTGGAGTGGCAAGTTTTGGTGCCTTTTTGATGCAACGTAATGTGACCACTCTTTCAGTAGCACCAAAAGATGTTCATGAAAATCAGATTCAGTTTGCTCTTGAGCGAGGTGTGCCTGCCATGGTAGCGGTATTTGCTACGCACCGTTTGTTGTTCCCAAGCCAGGCATTTGACCTGATCCATTGTTCAAGATGCAGAATTAATTGGACTCGTGATGATGGAATTTTGCTTCTTGAGGCCAACAGGCTCCTGAGGGCGGGTGGCTACTTTGTCTGGGCAGCACAGCCTGTTTACAAACATGAAGAGACCCTTCAAGAACAATGGACAGAAATGGAGAACCTGACAGCTAGCATTTGTTGGGAACTTGTACGAAAGGAGGGCTATATTGCTATATGGCGGAAACCTTTGGACAATAGCTGCTACCTTGGTCGAGACATTGATGCGCATCCTCCATTATGTGAGTCCAATGATGATCCCGATAATGTTTGGTATGTTGGTCTTAAGGCATGCATCACTCCATTACCTAATAATGGATATGGAGCAAATGTTACAGAGTGGCCTTTGCGGCTTCATCAACCACCAGACAGGCTCCATAGCATCCAATTGGATGCCATTATATCCAGAGATGAACTCTTGAGGGCTGACTCAAAATATTGGTTTGAAATAATAGAAAGTTATGTACGGGCTTTCCGTTGGGAGGATTACAACTTGAGAAATGTAATGGACATGAGGGCAGGATTTGGAGGAGTTGCTGCTGCGCTGCATGATCTCCAGATTGACTGTTGGGTTATGAATGTTGTTCCTGTCAGTGGATTTAATACCTTGCCTGTTATATATGACCGCGGGCTGACAGGAGTTATGCATGATTGGTGTGAACCATTTGATACATACCCAAGAACATATGATCTGCTGCACGCTGCAGGTCTTTTCTCTGTTGAGAAAAAGAGGCAAAAGTGTAACATCTCAACCATTATGCTTGAGATGGATCGGATGCTAAGACCGGGAGGACGAGTGTATATACGCGACACCACACTTGTTATAGGTGAGCTTCAAGAAATTGCAACTGCATTGGGATGGTCAACTACCATAAATGATGTAGGAGAGGGTCCCTATTCAAGCTGGAAGATATTAAGGTCTGATAAACGGTTCTGA 1992 0.4734 MKSLTTLWPMDILKTSSFVRITALSLFSLTLFLFLFTRFSPTSYSSLTFFSSTPEPPSREQAPPPQPNSPPPPPPPPPPSPPPPGVKIFRVPPLPPVERMGVLDGNGVMTEDFKVGELDPGFEEDSLNDTVSSVSSKGGERVREKVEKYKTCDVRTVDYVPCLDNVKAVKKYKESLRGEKYERHCKGMGLKCLVPRPKGYQRPIPWPKSRDEVWYSNVPHTRLVEDKGGQNWILIKRDKFVFPGGGTQFIHGADKYLDQISEMVPEIAFGHNTRVALDVGCGVASFGAFLMQRNVTTLSVAPKDVHENQIQFALERGVPAMVAVFATHRLLFPSQAFDLIHCSRCRINWTRDDGILLLEANRLLRAGGYFVWAAQPVYKHEETLQEQWTEMENLTASICWELVRKEGYIAIWRKPLDNSCYLGRDIDAHPPLCESNDDPDNVWYVGLKACITPLPNNGYGANVTEWPLRLHQPPDRLHSIQLDAIISRDELLRADSKYWFEIIESYVRAFRWEDYNLRNVMDMRAGFGGVAAALHDLQIDCWVMNVVPVSGFNTLPVIYDRGLTGVMHDWCEPFDTYPRTYDLLHAAGLFSVEKKRQKCNISTIMLEMDRMLRPGGRVYIRDTTLVIGELQEIATALGWSTTINDVGEGPYSSWKILRSDKRF* 664
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso13g0193 663 PANTHER SAM-DEPENDENT METHYLTRANSFERASE 15 662 IPR004159 GO:0008168
Gso13g0193 663 MobiDBLite consensus disorder prediction 119 138 - -
Gso13g0193 663 CDD AdoMet_MTases 277 371 - -
Gso13g0193 663 Gene3D Vaccinia Virus protein VP39 253 412 IPR029063 -
Gso13g0193 663 MobiDBLite consensus disorder prediction 57 87 - -
Gso13g0193 663 SUPERFAMILY Formin homology 2 domain (FH2 domain) 72 79 - -
Gso13g0193 663 PANTHER METHYLTRANSFERASE PMT12-RELATED 15 662 - -
Gso13g0193 663 Pfam Putative S-adenosyl-L-methionine-dependent methyltransferase 158 660 IPR004159 GO:0008168
Gso13g0193 663 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 494 623 IPR029063 -
Gso13g0193 663 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 182 402 IPR029063 -
Gso13g0193 663 MobiDBLite consensus disorder prediction 49 87 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso13g0193 Gso-Chr13 10906836 10913492 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso13g0193 - - gmx:100813466 1293.49
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g1233 14 29521932 29528232 Gso13g0193 13 10906836 10913492 GST