Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso13g0169 ATGTATCGACATGGCATTCTCGGCGGACATGACCGCAGCTCTGTCACCTCGTACCAGTGTTTCTTCAAGCCCCCTCCCTCATTGGGCCTGGGCCTGGGCCTGGGCTTTGAGTTTCGGAGGAAGGGAAGAAGACTCCGTAGACACCTCAACTTGGTCATCAGCGCTCAACTTTCCAACTCTTTTTCCTTGAGTTTCGGTCTCGACTCTCAGAACTTGAATTCCTTCCAGTCCAATGATCCATCACAGTTGTCTTGGATGGGTCCAGTTCCAGGCGATATTGCTGAAGTTGAGGCATTTTGTAGGATCTTTAGGAATTCAGAAAGGCTTCATTCTGCATTAATGGATGCATTATGTAACCCATTGACTGGTGAATGTAGCGTCTCATATGAGGTTCCATCAGATGAGAAACCTCAACTAGAGGATAAAATAGTTTCTGTCCTTGGATGTATGATATCCCTTGTGAACAAAGGTAGAGAGGATATTCTTTCTGGAAGATCCTCAATTATGAATTCCTTTCGTGCTGCAGAGGTTAGCACAACAGAGGATAAGCTCCCCCCGCTTGCCCTTTTCAGGAGTGAGATGAAAAGATGTTCTGAGAGCTTACATGTTGCTCTTGAGAACTATTTAATAGCTGATGATGATCGAAGCTTAAATGTATGGAGAAAACTTCAAAGACTGAAGAATGTCTGCTATGATTCTGGTTTTCCTCGTGGGGAGGGTTGTCCTTGTCACACACTATTTGCAAATTGGAGTCCTGTATATTTATCTGCTTCTAAAGATGAGTCGGAATCCAAAGACACAGAGCCAGCCTTTTGGACTGGTGGTCAGGTAACAGAAGAAGGCCTAAAGTGGTTACTGGATAAAGGATATAAAACTATTATAGATCTCAGAGCAGAGACTGTAAAAGATAACTTCTGTCAAGCGGCTCTGCAAGATGCTATTTCATCTGGAAGAATTGAATTGGTAAAAATCCCGGTTGAAGTTAGGACTGCACCTACAATGGAACAGGTTGTGAAGTTTGCATCTTATGTTTCAGATTGCAGCAAAAGGCCTATCTATCTTCACAGCAAGGAAGGAGTTTTGCGAACATCTTCCATGGTCTCCCGGTGGAGGCAGTACATGACTCGATCTTCATCACAGATTGTTTCTAATCCACCAGTTACACCCTATGACATGTTATCTCGTAATACAAATGGTTCTGCAAAACCTCAGGACTCTTCAGTGACTGCAGAGAGATCCTCCCTGGAAAAGGATATCAATTCATTGCAAGAGAGTTTGAACACAACACATAGTTCTGTTGGAACATTTGACAGAAGTACCTCCCAAAAGAAGCATAATGGTAAACCACTAGGTACTACAGCCTTGAGTGAAGTTTCTACTGATAATGGGGAATTATCAGAAGCCACTGCTGCTAATGAGGAAGGATCTTTTCCAAGTGACTTCAGAAAAATTAACCCTTTAGAAGCTCAAGTTCCTCCTTGTGATATCTTTTCCAAAAGAGAGATGTCGAAATTTTTGGGAAGCCGGAAGATCTCACCACCCTCTTATGTCAATTATCAGATTAGAAGGTCAGAATGCTCTCTGCAACCAAGGAACATGAATATCACAAGACTACAGGGAGGTGTGAATGTCAGCAGTAGTGACAATCCCAAACCTAAAAGTTTAGGTCCAGAAAGTTCAAATGGTTCAGCCCATGTGGATCATCCATCTAGAGAGTTCCAGATTGCAGTTAGCAGCAATAGGAAGGTAGTGAACGGGAGTACCTGTAGTTCTGTTAGGACAACAGTAAATGAATTTAGTGAACGGGAAATGCCTTACATGACTAATGCCAATGCTTCCATCATTGTGAAGGATGATTTTGATAATGTCACAACTACCTCTCAAAGGATTGAAGATCATATGGTTAAGGATAGGTTAGCCTTAAATGATGACGACTTGGGATCCATTGAAGGAGATATGTGTGCTTCTTCAACAGGAGTTGTAAGAGTGCAATCAAGAAAGAAAGCTGAGATGTTCCTAGTTCGAACAGATGGATTTTCTTGTACCAGAGAAAAAGTGACTGAATCTTCTTTGGCTTTCACTCATCCTAGCACCCAGCAGCAGATGCTTATGTGGAAGTCTATGCCAAAGAATGTGTTATTGTTGAAAAAGCTGGGGGAAGAACTAATGGAAGAAGCAAAAATGGTTGCTTCTTTTCTTTATCACCAAGAGAAAATGAATGTTCTTGTGGAACCTGATGTGCATGACATATTTGCTAGAATTCCAGGCTTTGGATTTGTTCAGACCTTCTATAGTCAAGATACCAGTGATCTACATGAGAAAGTCGATTTTGTGGCATGCTTGGGTGGAGATGGCGTTATACTGCATGCGTCAAATCTATTCAGAGATGCTGTTCCCCCTATTGTGTCATTTAACCTTGGCTCCCTTGGTTTTCTGACTTCTCATGATTTTGAAGATTACAAGCAAGACCTACGACAAGTCATCCATGGAAATAATACACGAGATGGTGTGTATATTACTCTTAGAATGCGCCTCCGATGTGAAATTTTTCGTAAAGGTAAAGCAATGCCAGGGAAAGTATTTGACATCCTCAATGAGGTTGTTGTTGATCGGGGTTCTAATCCATACCTTTCAAAGATTGAATGCTATGAACATGATCGACTTATAACCAAAGTACAAGGTGATGGAGTCATTGTGGCCACCCCTACAGGAAGTACTGCCTATTCTACAGCTGCCGGAGGTTCCATGGTCCATCCTAATGTCCCTTGCATACTGTTTACCCCAATCTGTCCACATTCACTCTCATTTAGGCCAGTTATACTTCCAGATTCTGCTCAACTAGAATTAAAGATTCCGGAAGATGCTAGAAGTAATGCCTGGGTTTCATTTGATGGGAAGAGAAGGCAGCAACTCTCGAGAGGCGATTCTGTCCGAATATCGATGAGCCAGCATCCCCTTCCAACTGTTAACAAGTTTGACCAAACGGGTGATTGGTTCAGTAGCTTGATTCGCTGCCTAAATTGGAATGAGAGGCTTGATCAAAAGGCTCTGTGA 3054 0.4237 MYRHGILGGHDRSSVTSYQCFFKPPPSLGLGLGLGFEFRRKGRRLRRHLNLVISAQLSNSFSLSFGLDSQNLNSFQSNDPSQLSWMGPVPGDIAEVEAFCRIFRNSERLHSALMDALCNPLTGECSVSYEVPSDEKPQLEDKIVSVLGCMISLVNKGREDILSGRSSIMNSFRAAEVSTTEDKLPPLALFRSEMKRCSESLHVALENYLIADDDRSLNVWRKLQRLKNVCYDSGFPRGEGCPCHTLFANWSPVYLSASKDESESKDTEPAFWTGGQVTEEGLKWLLDKGYKTIIDLRAETVKDNFCQAALQDAISSGRIELVKIPVEVRTAPTMEQVVKFASYVSDCSKRPIYLHSKEGVLRTSSMVSRWRQYMTRSSSQIVSNPPVTPYDMLSRNTNGSAKPQDSSVTAERSSLEKDINSLQESLNTTHSSVGTFDRSTSQKKHNGKPLGTTALSEVSTDNGELSEATAANEEGSFPSDFRKINPLEAQVPPCDIFSKREMSKFLGSRKISPPSYVNYQIRRSECSLQPRNMNITRLQGGVNVSSSDNPKPKSLGPESSNGSAHVDHPSREFQIAVSSNRKVVNGSTCSSVRTTVNEFSEREMPYMTNANASIIVKDDFDNVTTTSQRIEDHMVKDRLALNDDDLGSIEGDMCASSTGVVRVQSRKKAEMFLVRTDGFSCTREKVTESSLAFTHPSTQQQMLMWKSMPKNVLLLKKLGEELMEEAKMVASFLYHQEKMNVLVEPDVHDIFARIPGFGFVQTFYSQDTSDLHEKVDFVACLGGDGVILHASNLFRDAVPPIVSFNLGSLGFLTSHDFEDYKQDLRQVIHGNNTRDGVYITLRMRLRCEIFRKGKAMPGKVFDILNEVVVDRGSNPYLSKIECYEHDRLITKVQGDGVIVATPTGSTAYSTAAGGSMVHPNVPCILFTPICPHSLSFRPVILPDSAQLELKIPEDARSNAWVSFDGKRRQQLSRGDSVRISMSQHPLPTVNKFDQTGDWFSSLIRCLNWNERLDQKAL* 1018
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso13g0169 1017 MobiDBLite consensus disorder prediction 378 473 - -
Gso13g0169 1017 Pfam ATP-NAD kinase N-terminal domain 743 830 IPR002504 GO:0003951|GO:0006741
Gso13g0169 1017 Gene3D - 844 984 IPR017437 GO:0003951|GO:0019674
Gso13g0169 1017 MobiDBLite consensus disorder prediction 378 481 - -
Gso13g0169 1017 Pfam ATP-NAD kinase C-terminal domain 864 990 - -
Gso13g0169 1017 MobiDBLite consensus disorder prediction 538 567 - -
Gso13g0169 1017 PANTHER NAD KINASE 38 1017 - -
Gso13g0169 1017 SUPERFAMILY NAD kinase/diacylglycerol kinase-like 714 1012 IPR016064 -
Gso13g0169 1017 PANTHER NAD/NADH KINASE FAMILY PROTEIN 38 1017 - -
Gso13g0169 1017 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 268 382 IPR029021 -
Gso13g0169 1017 Hamap NAD kinase [nadK]. 710 1008 IPR002504 GO:0003951|GO:0006741
Gso13g0169 1017 Gene3D Protein tyrosine phosphatase superfamily 259 394 IPR029021 -
Gso13g0169 1017 Gene3D - 699 1009 IPR017438 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso13g0169 Gso-Chr13 10321904 10332528 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso13g0169 K00858 - gmx:100820030 2000.71
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g1221 14 28862376 28870327 Gso13g0169 13 10321904 10332528 GST
Gso13g0169 13 10321904 10332528 Gso6g0995 6 9605665 9612135 PCT
Gso6g0995 6 9605665 9612135 Gso13g0169 13 10321904 10332528 PCT