Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso13g0156 ATGTCGATCTTCGAGTACAACGGAAGCGCCGTGGTGGCTATGGTCGGCAAGAACTGCTTCGCCATTGCCAGCGACCGAAGACTCGGCGTTCAGCTCCAAACCATAGCCACGGATTTCCAACGCATTTCCAAGATTCACGACAAGCTCTTCATCGCTCTCTCTGGCCTCGCCACCGATGCTCAAACATTGTATCAGCGTCTTGTTTTCCGGCACAAACTGTATCAGCTTCGTGAAGAGAGGGATATGAAACCAGAGACCTTTGCCAGCTTAGTCTCTGCTCTGCTTTATGAGAAAAGGTTTGGTCCATACTTTTGTCAGCCTGTAATTGCTGGATTAGGGGATGAAGACAAACCATTCATCTGCACAATGGATTGTCTTGGGGCAAAGGAGCTTGCAAAAGATTTTGTTGTTTCTGGAACTGCATCTGAGTCTCTGTATGGTGCTTGTGAGGCGATGTTTAAGCCTGACATGGAACCAGAGGAATTGTTTGAGACCATCTCCCAAGCACTGCTATCATCTGTAGATCGTGATTGTTTGAGTGGCTGGGGAGGACATGTCTATGTTGTCACGCCAACCGAAGTGAAGGAAAGGATTTTGAAGGGAAGGATGGATTAA 615 0.478 MSIFEYNGSAVVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDKLFIALSGLATDAQTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLGDEDKPFICTMDCLGAKELAKDFVVSGTASESLYGACEAMFKPDMEPEELFETISQALLSSVDRDCLSGWGGHVYVVTPTEVKERILKGRMD* 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso13g0156 204 ProSiteProfiles Proteasome beta-type subunit profile. 8 189 IPR023333 -
Gso13g0156 204 ProSitePatterns Proteasome beta-type subunits signature. 12 59 IPR016050 GO:0005839|GO:0051603
Gso13g0156 204 Pfam Proteasome subunit 7 189 IPR001353 GO:0005839|GO:0051603
Gso13g0156 204 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 4 204 IPR029055 -
Gso13g0156 204 PANTHER PROTEASOME SUBUNIT ALPHA/BETA 4 198 - -
Gso13g0156 204 PANTHER PROTEASOME SUBUNIT BETA 4 198 - -
Gso13g0156 204 CDD proteasome_beta_type_3 6 200 IPR033811 GO:0019774|GO:0043161
Gso13g0156 204 Gene3D Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 1 204 IPR029055 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso13g0156 Gso-Chr13 10136352 10142183 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso13g0156 K02735 - gmx:100499664 409.838
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g1208 14 28398228 28404561 Gso13g0156 13 10136352 10142183 GST