Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso12g1616 ATGGTGGCACTGTGCATTGCAGGCTACATAGTGGGTCCCCCTCTCTACTGGCACTTCATTGAACACGTCAACCACTCTTCTTCATCTTCTTCTTGCGCTCCTTGCGTCTGCGATTGCTCTTCTCAACCCATCATTACGATTCCCCAAGGACTTAGCAACTCTTCATTTGAAGAATGTGCAAAGCACAATCCAAAGGTGGATGGAGACACTGAAAACAATGTTGCGGAGTTACTGTCGGAAGAACTAAATCTTCGGGAAACTGAAGCTTTGAAAAATCAGCATTGTGCTGACATGGCTCTGCTGGAGTCTAAGAAGATTGCATCTCAGTATCAAAAAGAAGCGGACAAGTGTAATTCAGGAATGGAAACATGCGAGGAAGCCAGGGAAAAAGCCGAGATGGCGTTAGTGGCTCAGAAGAAGCACTCTGCATTGTGGGAACAGAGAGCTCGTCAGAAAGGATGGAATGAAGGGCTTGCCAAATCTAAGAAACAGTCTAAAGGGAAAGTACACACTGCTTAG 519 0.4605 MVALCIAGYIVGPPLYWHFIEHVNHSSSSSSCAPCVCDCSSQPIITIPQGLSNSSFEECAKHNPKVDGDTENNVAELLSEELNLRETEALKNQHCADMALLESKKIASQYQKEADKCNSGMETCEEAREKAEMALVAQKKHSALWEQRARQKGWNEGLAKSKKQSKGKVHTA* 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso12g1616 172 MobiDBLite consensus disorder prediction 146 163 - -
Gso12g1616 172 Pfam Protein of unknown function (DUF1068) 1 157 IPR010471 -
Gso12g1616 172 PANTHER - 2 162 - -
Gso12g1616 172 MobiDBLite consensus disorder prediction 146 172 - -
Gso12g1616 172 PANTHER EXPRESSED PROTEIN 2 162 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso12g1616 Gso-Chr12 39713932 39720702 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso12g1616 - - gmx:100788299 337.806
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g1616 12 39713932 39720702 Gso11g3241 11 48201453 48203710 GST
Gso12g1616 12 39713932 39720702 Gso12g0790 12 8231727 8234270 PCT
Gso12g1616 12 39713932 39720702 Gso6g2531 6 47049412 47052152 PCT
Gso12g0790 12 8231727 8234270 Gso12g1616 12 39713932 39720702 PCT
Gso6g2531 6 47049412 47052152 Gso12g1616 12 39713932 39720702 PCT