Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso12g1439 ATGGCCAGAGGTTCTTCCCAGTCTCAGTCCTCCACTTCAACAGCCACGCGACCAGGACCAGCAGGCATGGCTCCCCGCGGTTCCGCCGCCGCCACCGCCGGCATGCGCCGCCGCCGTCTCGGCGGCGGAAACAGCTCCGCCAGCACCGGCGTTGGAGGCGGCAGCAGCAACATGCTGAGGTTCTACACGGACGACGCCCCGGGGCTGAAGATTTCGCCGACGGTGGTGCTCGTGATGAGCCTCTGCTTCATCGGCTTCGTCACCGCGCTCCACGTGTTCGGCAAACTCTACCGCTCCAAATCTGGTGGCGCCGTTTGA 318 0.6604 MARGSSQSQSSTSTATRPGPAGMAPRGSAAATAGMRRRRLGGGNSSASTGVGGGSSNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTALHVFGKLYRSKSGGAV* 106
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso12g1439 105 MobiDBLite consensus disorder prediction 1 56 - -
Gso12g1439 105 PIRSF Sec61_beta 11 102 IPR030671 GO:0005784|GO:0006886
Gso12g1439 105 PANTHER PROTEIN TRANSPORT PROTEIN SEC61 SUBUNIT BETA 1 103 - -
Gso12g1439 105 PANTHER SEC61 SUBUNIT BETA 1 103 IPR030671 GO:0005784|GO:0006886
Gso12g1439 105 Pfam Sec61beta family 55 94 IPR016482 -
Gso12g1439 105 MobiDBLite consensus disorder prediction 42 56 - -
Gso12g1439 105 MobiDBLite consensus disorder prediction 1 18 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso12g1439 Gso-Chr12 37144062 37144803 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso12g1439 K09481 - gmx:100814692 193.356
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g1439 12 37144062 37144803 Gso11g3395 11 49821594 49822364 GST
Gso12g1439 12 37144062 37144803 Gso12g0579 12 5195310 5196242 PCT
Gso12g1439 12 37144062 37144803 Gso11g1265 11 11707651 11710738 PCT
Gso12g0579 12 5195310 5196242 Gso12g1439 12 37144062 37144803 PCT
Gso11g1265 11 11707651 11710738 Gso12g1439 12 37144062 37144803 PCT