Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso12g1154 ATGGCAGCAAGAGCAACAGCAATCTTTAACACTCCCTCCTCCTCCTCCTTCTTCACATTCACACTCTTTCTCTCTCTCTCTCTCCTCCTCCAACTTTCTCTCTCCTCCCCCTCTCCCTCCATCCACGACCTTCTCCGCTCCAAAGGCTTGCCCCCCGGCCTCCTCCCAGAGGAGGTGAAATCCTACAGCTTCTCCGAAACCGGCCACTTGGAAGTCTTCCTTGACGCGCCGTGCCTGACCAAATACGAGAACAGAGTCCTCTTCGAGCAAGTCGTCACCGCCAACCTCACCTATGGAAGCCTCATAGGAGTGGAGGGTCTCCAGCAAGAGGAGCTCTTCGTGTGGCTACCCGTCAAGGACATAATCGTAAATGACCCCTCCTCGGGGTTGATACTGTTTGACATTGGCCTCGCCCACAAACAGCTCTCGCTCTCCCTCTTTGAAGATCCGCCTCACTGCAAACATGAAGGTGGGTTGAGGAATCATGTGAGGAAGGAAAAAGGTTTCGAGGCCCTGAGGTAG 522 0.5441 MAARATAIFNTPSSSSFFTFTLFLSLSLLLQLSLSSPSPSIHDLLRSKGLPPGLLPEEVKSYSFSETGHLEVFLDAPCLTKYENRVLFEQVVTANLTYGSLIGVEGLQQEELFVWLPVKDIIVNDPSSGLILFDIGLAHKQLSLSLFEDPPHCKHEGGLRNHVRKEKGFEALR* 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso12g1154 173 Pfam Protein of unknown function, DUF538 42 148 IPR007493 -
Gso12g1154 173 Gene3D - 27 155 IPR036758 -
Gso12g1154 173 PANTHER - 20 172 - -
Gso12g1154 173 SUPERFAMILY At5g01610-like 16 155 IPR036758 -
Gso12g1154 173 PANTHER T31J12.3 PROTEIN-RELATED 20 172 IPR007493 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso12g1154 Gso-Chr12 17244659 17246802 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso12g1154 - - gmx:100790931 297.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g1154 12 17244659 17246802 Gso6g2194 6 42056153 42058372 GST