Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso12g1146 ATGACTAACGTATCCTCGTCACTTCCGATTGTTGCCCAGGATGCAAAAGCCCCCTCATACTTCATTCGGAACACTGCAAATTTTTCTCCTTCCGTTTGGGGCGATTATTTCCTTTACTATGTTCCTAGTTCCGTGGAAGATGATAGTCACATCAAACAAGCTCAACTAACAAAAGAGGAAGTGAGGAAGATGCTTATTGCTCCTATTGATAACAATTTCTATTTTAAATTAGAATTTATTGACTCAGTCCAACGCTTGGGTGTTTCCTACCATTTTGAACATGAAATTGATGGAGCATTGCACCAAATTTACAACATTTCAACAAAGGACAATAATATCATAACTCACGATGATGATCTTTGTCATGTGGCTTTACTCTTTCGGTTGCTTAGGCAACAAGGTTATCACATTTCATCAAATGTATTTTACAAATTCAAAGACCAAACTAGAAACTTTAGTGAAAAAGCAGCCAATGATATACAAGGAATGTTGAGCTTGTACGAAGCTGCTGAACTAAGAATGCATGGAGAGGATATACTTGAAGAAGCACATAATTTCGCTCTTGTTCAGTTAACTAAGTCTCTAACTACCCAATTAAGTCCTTCTATGATTGCACAAGTCAAGCATAGCTTAAGACGATCACTTCGAAAGGGATTGCCTAGGCTGGAGGCCACATATTATATGTCTTTCTACGAAGAAGATTCTTCACATGATGAAAAATTGCTAACATTTGCAAAACTAGATTTTAATATGTTGCAGGAGTTACATCAGAAAGAAGTTAACAATGTGACCAGGTGGTGGATTAAGAATTTAAATGTCTCAACGAAATTGCCATTTGTACGAGATAGGATTGCAGAATGTTACTTTTGGATTTTGGGAATATACTTTGAGCCACAATATTCTCTTGCTAGAAGGATAACAACGAAAGTAATTGCTCTATGTTCTGTCATTGATGACATGTATGATGCCTATGGAACCATTGACGAACTTGAGCTTTTCACCAATGCAATTGAGAGGTGGGATATTTGTTGCTTGGATGATCTCCCAGAATACATGAAAGTATGTTATATAGAAATTTTGAATGTTTATGAAGAAATAGAGGAAGAGATGAGAAAACAAGGAAAAGTATATTGCATCAAGTATGCTAAGAAAGAGATGAAAAGATTAATCAAGGCTCAAATGGCTGAGGCAAGATGGCTTCATTGCAATCATACACCGTCAATAGAGGAGTACATGCAAGTTAGAAATGTATCAAGTGGTTACTCTATGGTGATCACCATATGTTTTGTTGGCATGAAAGATACAACAGAGGAGGTCCTTATATGGGCAACAAGTGATCCAATAATTATTGGGGCTGCTTCAATTATTTGTAGGCTTATGGATGACATTGTTGGAAATGAGTTTGAGCAGGAAAGAAGACACGTTGCATCAAGCATTGAAAGCTATATGAAGCAACATAACACCTCAAGGCAAGATGCCATTAATAAACTACTTGAGATGGTTAAGAGTGCTTGGAAGGACATCAATGAGGCATGCCTTAATCCTACTGAAGTGCCAATGAATTTTCTTTTGCGTGTTGTCAACCTTGTGCGCATGATTGACGTGCTTTACAAAGATGAAGATAATTATACAAATGCAGGAGGGTTAATGAAGGATTACATCAAAACTTTATTAGTTAATAAGATGTCTGCCCGTATAAGCTAG 1704 0.3691 MTNVSSSLPIVAQDAKAPSYFIRNTANFSPSVWGDYFLYYVPSSVEDDSHIKQAQLTKEEVRKMLIAPIDNNFYFKLEFIDSVQRLGVSYHFEHEIDGALHQIYNISTKDNNIITHDDDLCHVALLFRLLRQQGYHISSNVFYKFKDQTRNFSEKAANDIQGMLSLYEAAELRMHGEDILEEAHNFALVQLTKSLTTQLSPSMIAQVKHSLRRSLRKGLPRLEATYYMSFYEEDSSHDEKLLTFAKLDFNMLQELHQKEVNNVTRWWIKNLNVSTKLPFVRDRIAECYFWILGIYFEPQYSLARRITTKVIALCSVIDDMYDAYGTIDELELFTNAIERWDICCLDDLPEYMKVCYIEILNVYEEIEEEMRKQGKVYCIKYAKKEMKRLIKAQMAEARWLHCNHTPSIEEYMQVRNVSSGYSMVITICFVGMKDTTEEVLIWATSDPIIIGAASIICRLMDDIVGNEFEQERRHVASSIESYMKQHNTSRQDAINKLLEMVKSAWKDINEACLNPTEVPMNFLLRVVNLVRMIDVLYKDEDNYTNAGGLMKDYIKTLLVNKMSARIS* 568
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso12g1146 567 Pfam Terpene synthase, N-terminal domain 33 211 IPR001906 GO:0010333|GO:0016829
Gso12g1146 567 SUPERFAMILY Terpenoid synthases 237 562 IPR008949 -
Gso12g1146 567 SFLD Terpene Cyclase Like 1 C Terminal Domain 238 562 IPR034741 -
Gso12g1146 567 PANTHER OS04G0344100 PROTEIN-RELATED 3 544 - -
Gso12g1146 567 Pfam Terpene synthase family, metal binding domain 242 507 IPR005630 GO:0000287|GO:0010333|GO:0016829
Gso12g1146 567 PANTHER TERPENE SYNTHASE 2-RELATED 3 544 - -
Gso12g1146 567 SFLD Isoprenoid Synthase Type I 238 562 - -
Gso12g1146 567 Gene3D Farnesyl Diphosphate Synthase 30 552 IPR008949 -
Gso12g1146 567 Gene3D - 71 237 IPR036965 GO:0010333|GO:0016829
Gso12g1146 567 SUPERFAMILY Terpenoid cyclases/Protein prenyltransferases 30 237 IPR008930 -
Gso12g1146 567 CDD Terpene_cyclase_plant_C1 23 560 IPR044814 GO:0010333|GO:0016102
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso12g1146 Gso-Chr12 16793756 16802019 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso12g1146 K15803 - gmx:100802427 1135.17