Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso12g1142 ATGTTGAGCTTGTATGAAGCTGCTGAACTAAGAATGCATGGAGAGGATATACTTGAAGAAGCACATAATTTCGCTCTTGTTCAGTTAACTAAGTCTCTAACTACCCAATTAAGTCCTTCTATGATTGCACAAGTCAAGCATAGCTTAAGACGATCACTTCGAAAGGGATTGCCTAGGCTGGAGGCCACATATTATATGTCTTTCTACGAAGAAGATCCTTCACATGATGAAAATTTGCTAACATTTGCAAAACTAGATTTTAATATGTTGCAGGAGTTACATCAGAAAGAAGTTAACAATGTGACCAGGTGGTGGATTAAGAATTTAAATGTCTCAACGAAATTGCCATTTGTACGAGATAGGATTGTAGAATGTTACTTTTGGATTTTGGGAATATACTTTGAGCCACAATATTCTCTTGCTAGAAGGATAACAACGAAAGTAATTGCTCTATGTTCTGTCATTGATGACATGTATGATGCCTATGGAACCATTGACGAACTTGAGCTTTTCACCAATGCAATTGAGAGGTGGGATATTTGTTGCTTGGATGATCTCCCAGAATATATGAAAGTATGTTATATGGAAATTTTGAATGTTTATGAAGAAATAGAGGAAGAGATGAGAAAACAAGGAAAAGTATATTGCATCAAGTATGCTAAGAAAGAGATGAAAAGATTAATCAAGGCTCACATGGCTGAGGCAAGATGGCTTCATTGCAATCATACACCGACAATAGAGGAGTACATGCAAGTTAGAATTGTATCAAGTGGTTACTCTATGGTGATCACCATATGTTTTGTTGGCATGAAAGATACAACAGAGGAGGTCCTTATATGGGCAACAAGTGATCCAATAATTATTGGGGCTGCTTCGATTATTAGTAGGCTTATGGATGACATTGTTGGAAATGAGTTTGAGCAGGAAAGAAGACACATTGCATCAAGCATTGAATGCTATATGAAGCAACATAACACCTCAAGGCAAGATGCCATTAATAAACTACTTGAGATGGTTAAGAGTTCTTGGAAGGACATCAATGAGGCATGCCTTAATCCTACTGAAGTGCCAATGAATTTTCTTTTGCGTGTTGTCAACCTTGTGCGCATGATGGACGTGCTTTACAAAGATGAAGATAATTATACAAATGCAGGAGGGTTAATGAAGGATTACATCAAAACTTTATTAGTTAATAAGATGTCTGCCCGTATAAGCTAG 1218 0.3695 MLSLYEAAELRMHGEDILEEAHNFALVQLTKSLTTQLSPSMIAQVKHSLRRSLRKGLPRLEATYYMSFYEEDPSHDENLLTFAKLDFNMLQELHQKEVNNVTRWWIKNLNVSTKLPFVRDRIVECYFWILGIYFEPQYSLARRITTKVIALCSVIDDMYDAYGTIDELELFTNAIERWDICCLDDLPEYMKVCYMEILNVYEEIEEEMRKQGKVYCIKYAKKEMKRLIKAHMAEARWLHCNHTPTIEEYMQVRIVSSGYSMVITICFVGMKDTTEEVLIWATSDPIIIGAASIISRLMDDIVGNEFEQERRHIASSIECYMKQHNTSRQDAINKLLEMVKSSWKDINEACLNPTEVPMNFLLRVVNLVRMMDVLYKDEDNYTNAGGLMKDYIKTLLVNKMSARIS* 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso12g1142 405 Gene3D - 1 89 IPR036965 GO:0010333|GO:0016829
Gso12g1142 405 SUPERFAMILY Terpenoid synthases 75 400 IPR008949 -
Gso12g1142 405 Pfam Terpene synthase family, metal binding domain 80 345 IPR005630 GO:0000287|GO:0010333|GO:0016829
Gso12g1142 405 PANTHER TERPENE SYNTHASE 2-RELATED 1 382 - -
Gso12g1142 405 PANTHER OS04G0344100 PROTEIN-RELATED 1 382 - -
Gso12g1142 405 CDD Terpene_cyclase_plant_C1 1 398 IPR044814 GO:0010333|GO:0016102
Gso12g1142 405 SFLD Terpene Cyclase Like 1 C Terminal Domain 77 400 IPR034741 -
Gso12g1142 405 SFLD Isoprenoid Synthase Type I 77 400 - -
Gso12g1142 405 SUPERFAMILY Terpenoid cyclases/Protein prenyltransferases 1 75 IPR008930 -
Gso12g1142 405 Gene3D Farnesyl Diphosphate Synthase 90 404 IPR008949 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso12g1142 Gso-Chr12 16569247 16574095 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso12g1142 K15803 - gmx:100802427 792.727