Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso12g1123 ATGCCTCCCGTCGCTCCTCGATCCGGTGATGCCATATTCGCCAACGTCGAACGCGTCAATGCGGAGCTGTTTACTTTGACGTATGGCGCAATTGTGCGTCAATTGCTCACGGATCTGGAAGAGGCTGAGGAGGTTAACAAGCAGCTTGATCAAATGGGTTACAATATTGGAATCCGTTTGATTGATGAGTTTTTAGCCAAGTCTAATGTCTCCAGATGCAACGATTTCAGAGAGACGACTGATGTTATTGCAAAGGTTGGTTTTAAAATGTTCCTCGGTGTTACTGCATCTGTGACCAATTGGGATGCTGATGGAACATGTTGTAGTATTGTTTTGGAGGATAATCCTTTGGTAGATTTTGTTGAGCTTCCTGACAACTGCCAAGGTTTGTACTATTGCAACATCTTAAGTGGAGTCATCAGAGGAGCCTTAGATATGGTGTCAATGAAAACTGAGGTAACTTGGCTTCGTGATGTGCTTCGCGGTGATGATGTGTTTGAGTTGCAGGTAAAACTTCTCAAGCATGTCCCAGAAGAGTATCCATACAAGGATGACGAGTGA 561 0.4439 MPPVAPRSGDAIFANVERVNAELFTLTYGAIVRQLLTDLEEAEEVNKQLDQMGYNIGIRLIDEFLAKSNVSRCNDFRETTDVIAKVGFKMFLGVTASVTNWDADGTCCSIVLEDNPLVDFVELPDNCQGLYYCNILSGVIRGALDMVSMKTEVTWLRDVLRGDDVFELQVKLLKHVPEEYPYKDDE* 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso12g1123 186 PANTHER TRAFFICKING PROTEIN PARTICLE COMPLEX SUBUNIT 3 1 186 IPR016721 GO:0030008|GO:0048193
Gso12g1123 186 CDD TRAPPC3_bet3 20 174 IPR016721 GO:0030008|GO:0048193
Gso12g1123 186 Gene3D Trafficking protein particle complex subunit 3 4 185 - -
Gso12g1123 186 Pfam Transport protein particle (TRAPP) component 24 171 IPR007194 -
Gso12g1123 186 Coils Coil 32 52 - -
Gso12g1123 186 PIRSF TRAPP_1_Bet3 4 185 IPR016721 GO:0030008|GO:0048193
Gso12g1123 186 SUPERFAMILY Ligand-binding domain in the NO signalling and Golgi transport 18 176 IPR024096 -
Gso12g1123 186 PANTHER PROTEIN PARTICLE COMPLEX SUBUNIT, PUTATIVE-RELATED 1 186 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso12g1123 Gso-Chr12 15777188 15786189 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso12g1123 K20302 - gmx:100306217 378.252
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g1123 12 15777188 15786189 Gso6g2234 6 43230449 43234578 GST