Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso12g1107 ATGACCAGAAAAGAGTGTCATCCATTGTTAAGGGGTGGGAGAGGGGATAGCAAATATAAACATGGATTTTCTGCAGCTGAGATGGAGTCACTGGCAAGCATATGTGAGGTTGTGTTGCCTCCTTTGCCTATGGATGCTCTTAAGATCAGAAAGGAAGACCAAATTGATGATTATGATTCTAGCAAGAGTCTCAAGTCCTTCTGGGACATTTCTGCTTCTCGCTATCCAATCCCTCATGAGGTTGCTGAGATGTTAACGAAGAGGAGCTTAATTGAAGCAGTAATACTGATTAGAGTAGTTTTATGGCTGCTGGCAACAAGGTTGGGAACCTTGTTGCTCTGTGGTTTCCTCTGTCTTGGTGAAAAATGGCCCTATGTCAACAACTTCTCAAACATATCTTTGGAGAAAAGAGAAATGGTTATGCAGAAGTGGCTGAAACATAGGTTCCTCACACCTATTAGACTGGCCTTTGCTTACATCAAAGTCTTGTGTCTCTTTGTTTTTTTCTCTTGGGTTGATGAAAATGGTGACAACCCAGCATGGAAAGCCATTGGATATGAGGTACCAGCTGATGAAAACTTGACCAATGCCTCCAAAACTAGGCCCCTTGAAAAGGGGATTATAGAAACCATGAATGAATCTGACTCCACTCTTCAACAATCTCTTGCTAACAAAGGCCTTAATGTTACACTGGACTCAAAAAGCAACATCCTCAAAGTCAAATGTGATGCACTAGTTGTTGGTTCTGGTTGTGGTGGAGGTGTTGCGGCTGCTGTTCTTTCAAGTGCTGGCTACAAGGTGGTTGTTCTTGAGAAAGGAAACTATTTTTCTACTCAGGATTATTCATCTCTAGAAGGTCCTTCCATGAATCAACTATATGAAACTGGAGGGATCCTTGCTTCTGTGGACTCAAGAGTGCTAGTTTTGGCAGGATCAACAGTGGGTGGTGGCTCTGCTGTTAATTGGTCAGCCTGCATTAAGACCCCACACAAGGTGCTAAATGAGTGGTCTGAGAATCACAAGCTTCCCTTCTTTTCAAGCCAAGAATATCTCTCCGCAATGGAAACTGTGTGTGAAAGGATTGGTGTAACAGAAAACTGTACACAAGAGGGATTCCAAAACCAAGTGCTGAGAAAAGGGTGTCAAAATCTTGGCCTCAAAGTTGACTATGTGCCAAGAAACTCCTCAGGGAATCACTACTGTGGCTCATGTGGTTATGGCTGTCCGAAAGGAGAGAAACAAGGGACTCAAGCTACATGGCTTGTAGATGCAGTTGAAAGAGATGCAGTAATAATAACAGGATGCAAAGCTGAGAGGTTCTTGTTGGAAAGCAACAGGAGTGGAAATGGCAGAAAGAAGAAATGTTTGGGAGTGATGGCAAAAGCATTAAACAGCAGAGTCACAATGAAGTTACAAATTGAGGCCAAGGTGACAATTTCTGCAGGTGGGGCACTTTTGACACCCCCTTTGTTAATCTCTAGTGGACTAAAAAACAAGAACATAGGTAAAAACCTTCATCTCCACCCTGTGCTAATGACATGGGGATACTTTCCAGAATCAAATGATTCAGAATTCAAAGGAAAAGTCTACGAGGGAGGTATAATAACATCAGTCCACAAAGTGCCATCAACAGACTCCAATTCAGATTCAAGGGCAATAATTGAAACCCCTTCGCTAGGACCAGCTTCCTTTGCAGCACTGTGTCCTTGGGAGTCAGGACTAGACTTTAAGGAAAGAATGCTGAATTACCTTAGAACTTCACATTTGATAACAATAATAAGAGACATGGCTTGTGGACAGGTATCAACAGAAGGAAGGATCAGCTACAAGCTGAATGAAATTGACAAGGAGAACATGAAGGCTGGCTTGAAACAAGCACTGAAGATTCTTATAGCTGCAGGAGCAGTTGAGGTAGGTACACACAGAAGTGATGGTCAGAGACTTAAGTGTGATGGCATTGGTGAAAATGAAGTGCAAGAGTTCTTGGACAGTGTGTGTCCAATGGAGGGGGCACTTTCACCAGGTGAGTATTGGAACATATATTCTTCTGCACATCAAATGGGGAGCTGCAGAATGGGAGTCAGTGAGAAAGAAGGTGCAGTTGATGAAAATGGTGAGACATGGGAGGCTGAAGGGTTGTTTGTTTGTGATGCTAGTGTGCTTCCAAGTGCTGTTGGTGTCAATCCCATGATCACGGTCCAATCAACTGCATACTGCATCTCTAATAGAATAGCAGATTATCTTAGAAGGGATTAA 2256 0.4295 MTRKECHPLLRGGRGDSKYKHGFSAAEMESLASICEVVLPPLPMDALKIRKEDQIDDYDSSKSLKSFWDISASRYPIPHEVAEMLTKRSLIEAVILIRVVLWLLATRLGTLLLCGFLCLGEKWPYVNNFSNISLEKREMVMQKWLKHRFLTPIRLAFAYIKVLCLFVFFSWVDENGDNPAWKAIGYEVPADENLTNASKTRPLEKGIIETMNESDSTLQQSLANKGLNVTLDSKSNILKVKCDALVVGSGCGGGVAAAVLSSAGYKVVVLEKGNYFSTQDYSSLEGPSMNQLYETGGILASVDSRVLVLAGSTVGGGSAVNWSACIKTPHKVLNEWSENHKLPFFSSQEYLSAMETVCERIGVTENCTQEGFQNQVLRKGCQNLGLKVDYVPRNSSGNHYCGSCGYGCPKGEKQGTQATWLVDAVERDAVIITGCKAERFLLESNRSGNGRKKKCLGVMAKALNSRVTMKLQIEAKVTISAGGALLTPPLLISSGLKNKNIGKNLHLHPVLMTWGYFPESNDSEFKGKVYEGGIITSVHKVPSTDSNSDSRAIIETPSLGPASFAALCPWESGLDFKERMLNYLRTSHLITIIRDMACGQVSTEGRISYKLNEIDKENMKAGLKQALKILIAAGAVEVGTHRSDGQRLKCDGIGENEVQEFLDSVCPMEGALSPGEYWNIYSSAHQMGSCRMGVSEKEGAVDENGETWEAEGLFVCDASVLPSAVGVNPMITVQSTAYCISNRIADYLRRD* 752
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso12g1107 751 PANTHER LONG-CHAIN-ALCOHOL OXIDASE 3 751 - -
Gso12g1107 751 Pfam GMC oxidoreductase 243 510 IPR000172 GO:0016614|GO:0050660
Gso12g1107 751 PIRSF Lg_Ch_AO 9 751 IPR012400 GO:0046577
Gso12g1107 751 Gene3D - 613 751 IPR036188 -
Gso12g1107 751 Pfam GMC oxidoreductase 606 739 IPR007867 GO:0016614
Gso12g1107 751 PANTHER LONG-CHAIN-ALCOHOL OXIDASE 3 751 - -
Gso12g1107 751 Gene3D - 227 546 IPR036188 -
Gso12g1107 751 SUPERFAMILY FAD/NAD(P)-binding domain 241 749 IPR036188 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso12g1107 Gso-Chr12 15134774 15139531 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso12g1107 83 748 Acyl Lipid Metabolism Gene Families AT3G23410 65.373 0.0 873
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso12g1107 K17756 - gmx:100776182 1468.37
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g1107 12 15134774 15139531 Gso6g2257 6 43691849 43696793 GST