Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso12g0943 ATGGACAAAGAATTCTCCACTATACCGGTTGCCGGCCGGAGCTCCGACGATGTGAGCTTTGCTGATACAGTTTTTGGGTTTTGGGATTCATCCAATTCAAGCAATGATCGCGACGACGACGACGACGATGACGACGACGATGATGAAACCATTTGTACTGCGGAAAATGGTAAAGCATTTTGGGAGGAACAATATCAACTTCTTAAGGCAATTTTGTGCAGGACCAGTTCATATGAGACAAAAGTTCGGCAAGCAACGAAGGGGGTTCTAAGAGAACTGAACATATCGGAGATGCTTTGTATTTGCCGGAGGGCAGAGGTGGCTAAGAGTTGCAGGAATTGCTTGCTGAGGGAAGTATGTGATCGATTATTGAACCTTGGCTACAATTGTGCCATTTGCAAATCTAAATGGAGGAGTTCACCCGAAATCCCATCAGGGGAGCATACTTATTTGGAAGTGAGAAATAATGTATCAAACACCAAACGAGGGGCAGTAAAAGTGGTGATTGAATTGTACTTTAGAGCCGAATTCGAGATGGCACGGGCCAATGAAGAGTACAACAAATTAATTAAGCGATTACCCGAAGTATTTGTTGGTAAATCAGACAGATTAAGAGCGTTAGTCAAGATTATGTGCTCAGCATCGAAAAAATGCATGAAGGAGAAAAAAATGCACATTGGACCATGGAGGAAACACAAGTACATGCAAGCTAAGTGGTTCAGCACGTGCGAAATGTCCACAACGGAATCACTGCCAACGATAATGAACTCTGCTCAGCAACCAAAAGCTAAGGCTTCAATGCTCACTTTTGATTTATTAGATAACATTATTCACGGGTTGCACTGTACTACAGTTGAGGTCGTGTGA 867 0.4314 MDKEFSTIPVAGRSSDDVSFADTVFGFWDSSNSSNDRDDDDDDDDDDDETICTAENGKAFWEEQYQLLKAILCRTSSYETKVRQATKGVLRELNISEMLCICRRAEVAKSCRNCLLREVCDRLLNLGYNCAICKSKWRSSPEIPSGEHTYLEVRNNVSNTKRGAVKVVIELYFRAEFEMARANEEYNKLIKRLPEVFVGKSDRLRALVKIMCSASKKCMKEKKMHIGPWRKHKYMQAKWFSTCEMSTTESLPTIMNSAQQPKAKASMLTFDLLDNIIHGLHCTTVEVV* 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso12g0943 288 Pfam PDDEXK-like family of unknown function 22 244 IPR006502 -
Gso12g0943 288 MobiDBLite consensus disorder prediction 26 48 - -
Gso12g0943 288 PANTHER DUF506 FAMILY PROTEIN 13 288 - -
Gso12g0943 288 TIGRFAM A_thal_3542: uncharacterized plant-specific domain TIGR01615 118 244 IPR006502 -
Gso12g0943 288 PANTHER OS03G0796600 PROTEIN 13 288 IPR006502 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso12g0943 Gso-Chr12 11237538 11241135 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso12g0943 - - gmx:100815222 547.354
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g0943 12 11237538 11241135 Gso12g0943 12 11237538 11241135 ECH