Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso12g0902 ATGACCCTTGTTCCTGATTGCACCCTCATGAGATTGAGGAAGCGTAAACGATGTTTTCCTTCTTGTTCCTCTCTTCGCAAAGTAGACGAGGATGAGATTTATTGGAGACGCAGAAAGGAAGATGAAGAGTTGGAATGGACACCTAATTCCACTCACTTAATATCTCAGTTTACTCAATGTTTTAGAGGACTCTTTCACCGCACAACCACCAAGCGAGATGACAAATTCATTGATTATCCTTTGAGTCCTATTGAGGAGGAAAGACTTCAAAGGCTTCAAGAACGGCTGCAAGTTCCTTATGATGAGACTCGACCTGATCATCAAGAATCACTAAGAGCTTTGTGGCATTGTTCCTTTCCTAATGTATCTCTGGAAGGCCTAATATCTGACCAATGGAAAGATATGGGATGGCAAGGTCCTAATCCATCGACTGACTTTAGGGGGTGTGGCTTCATTTCCCTTGAAAATCTACTGTTTTTCGCAAGGAAATATCCGGAATCTTTTCACAAGCTGTTGTTGAAGAAAGATGGAAAGAGAGCAACCTGGGAATATCCATTTGCTGTTGCTGGCATTAATATATCATTTATGTTGATACAGATGTTGGATTTATGCTCAGAAAAGCCACGATGTCTTCCAGGCATGAATTTTGTTAAGTTATTAGGAGAAAATGAAGAAGCATTCGATGTTCTATACTGTATAGCATTTGAGATGATGGATGCACAATGGCTGGCTATGCATGCTTCCTACATGGATTTTAACGATGTTCTACAAGCAACAAGAATGCAATTGGAGAGAGAGCTATCCTTAGAAGACATCAACAAAATACAAGACCTGCCTGCTTACAATCTGTTGTAA 855 0.4035 MTLVPDCTLMRLRKRKRCFPSCSSLRKVDEDEIYWRRRKEDEELEWTPNSTHLISQFTQCFRGLFHRTTTKRDDKFIDYPLSPIEEERLQRLQERLQVPYDETRPDHQESLRALWHCSFPNVSLEGLISDQWKDMGWQGPNPSTDFRGCGFISLENLLFFARKYPESFHKLLLKKDGKRATWEYPFAVAGINISFMLIQMLDLCSEKPRCLPGMNFVKLLGENEEAFDVLYCIAFEMMDAQWLAMHASYMDFNDVLQATRMQLERELSLEDINKIQDLPAYNLL* 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso12g0902 284 Pfam ELMO/CED-12 family 91 256 IPR006816 -
Gso12g0902 284 ProSiteProfiles ELMO domain profile. 106 267 IPR006816 -
Gso12g0902 284 PANTHER BNAC05G01970D PROTEIN 62 284 - -
Gso12g0902 284 PANTHER ENGULFMENT AND CELL MOTILITY 62 284 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso12g0902 Gso-Chr12 10394032 10398917 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso12g0902 K23538 - gmx:100800270 577.785
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g0902 12 10394032 10398917 Gso12g0902 12 10394032 10398917 ECH
Gso12g0902 12 10394032 10398917 Gso6g2429 6 45932053 45936966 GST