Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso12g0882 ATGGCTTACAACAAGGGGGTGCATAGCAGCAGCAGTGGAGGGAGTCACAGAGGAAGGCCTTATGCGTTGGTATTGCTTATCACATTTGGGATTGCACTGCTTGGGGTTATGGTGCTTCACAAGCTCAGAGAGAGGCGCATCTACACCATTCTTGTCAAAGAGAAAGACCAACAGATTCTTGCTCTTCAGCTTCTCTTGCAGAAGGAAAGAGATGGCAGCAAAGAGTTGAGAGGGAAGAACGAAGAGATGAAGGGGAAGCTATACTCCCTGAGAAGTCAAAAAATGGAGCTGGCTAGAACGGTTGTGGAGATGCAGTCCACCCTTGATTCACTAAAAGATGAGCAGAAACTGATGGAATCAGAATTTGAGGAGCAGCAGAATGAGCTGAGATTGATGCAAGAAAAGGGGAAAAGTGTTGGACAAGGAAGATCTGAAATAGAAGCATTAAGAGATAATCTTAAGCATAAGGAAGCAGAGATGGAGGACTTGAAGCGCCGTCTTGAAATCCCGGTTAATGATCATCCAACTATCTTTCCTGAAATTGTGACAGCAAATGGAACAATAGCAGCACAGGATGAAAATGGGAAGGATGAGATTTCAGGTGAATCTGCCAAACACGAAGGTGATACTGATAACAATGAAGGCACAATTAAAAGTGAATTAACCAAGTTCAAAGATGGAGAGGTTGCAACTGAGATAAAAGATGAAATTAGGACTGATGGGGAGCTAGGAAAGGCAAATGAAGACCCTCGAGATGATGGGGGTGGCGCGGCAAAAGATCTTGATGATGTTGAAGAAGCGGATGGGAGAGAAAAGAAAGCAATACAAGAGTATGCAGGACAAGTAGAGAATAATACAGATGGTGGAGATCAGGTGAAGCAATTGGCTGGGATGAAGAGGAAACATGGCCGTGCAAGTAGAACAAAAGGGAAGCGCTGGAGAACCACTGTCAAGAATAGTTTAATGGAGAACAATGGGGTTTTTGAAAACCACTCGGGAGATAGAAAGGTTTACAAAGATGAGTTGAAAGGTAGAAGATTTGGGAAAGTCTCTAATGAGGGAAATTTTGCAAGAAAGGATGTGGGATTGAACAATAACAGCCATAGAAAAGACAAGCCACTAGCCAAATTGTTGAAGCCTGAAAACCATGAAAGCAAAGAAGATGCCAATGACATGAAAGTGAATAATACAAAACACCAGGAGACAAATAGTGGAACTAACATATACTCACAGAATCAGATACTGGATGAAATGAGGCAGTTAGAAGAGAATGAACAGAGTCAAGTCCAACAAAACTGGAGCAAGAGGCATATCAGAAAAGCTGACAAGAATGCAGGGAAAACAAAATCCAAGGTGTTACTTGAAGGGCCTGAAGAATTAGAGGAGATTTTGGATGTAAAGAAGCAAGAGGAGGATCCCATTGACAGTGACCATGATGATGAGGATAATGACAACTATTTCTTCAAGGATTTGCACTCTGAATTTTTAGACGAAAAGGATGAATACAAGGAAGAGATAGACGAGTCAGAGTTTCAGACTGATTTGTAA 1548 0.4205 MAYNKGVHSSSSGGSHRGRPYALVLLITFGIALLGVMVLHKLRERRIYTILVKEKDQQILALQLLLQKERDGSKELRGKNEEMKGKLYSLRSQKMELARTVVEMQSTLDSLKDEQKLMESEFEEQQNELRLMQEKGKSVGQGRSEIEALRDNLKHKEAEMEDLKRRLEIPVNDHPTIFPEIVTANGTIAAQDENGKDEISGESAKHEGDTDNNEGTIKSELTKFKDGEVATEIKDEIRTDGELGKANEDPRDDGGGAAKDLDDVEEADGREKKAIQEYAGQVENNTDGGDQVKQLAGMKRKHGRASRTKGKRWRTTVKNSLMENNGVFENHSGDRKVYKDELKGRRFGKVSNEGNFARKDVGLNNNSHRKDKPLAKLLKPENHESKEDANDMKVNNTKHQETNSGTNIYSQNQILDEMRQLEENEQSQVQQNWSKRHIRKADKNAGKTKSKVLLEGPEELEEILDVKKQEEDPIDSDHDDEDNDNYFFKDLHSEFLDEKDEYKEEIDESEFQTDL* 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso12g0882 515 MobiDBLite consensus disorder prediction 298 312 - -
Gso12g0882 515 MobiDBLite consensus disorder prediction 435 474 - -
Gso12g0882 515 MobiDBLite consensus disorder prediction 363 395 - -
Gso12g0882 515 PANTHER OS08G0177500 PROTEIN 1 511 - -
Gso12g0882 515 Coils Coil 492 512 - -
Gso12g0882 515 Coils Coil 94 135 - -
Gso12g0882 515 MobiDBLite consensus disorder prediction 187 270 - -
Gso12g0882 515 PANTHER OS08G0177500 PROTEIN 1 511 - -
Gso12g0882 515 MobiDBLite consensus disorder prediction 283 312 - -
Gso12g0882 515 MobiDBLite consensus disorder prediction 422 486 - -
Gso12g0882 515 Coils Coil 139 166 - -
Gso12g0882 515 MobiDBLite consensus disorder prediction 195 270 - -
Gso12g0882 515 MobiDBLite consensus disorder prediction 356 404 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso12g0882 Gso-Chr12 9869761 9872496 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso12g0882 - - gmx:100791306 974.541
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g0882 12 9869761 9872496 Gso12g0882 12 9869761 9872496 ECH
Gso12g0882 12 9869761 9872496 Gso6g2441 6 46108862 46111621 GST