Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso12g0870 ATGCAATCATTCCCCCCCATCCCCACTCTCGCATGCCTTTACCTTACTTTCTTTACGTCACTACTATTCCTACTACCTTTTTCTCGTGCCGGTTTACTCTCCGAACCGGTGAGCGACCCCAACCAGCCTCTCGAACCGGGCTCCAACACTGTCCCCGCCTTCCCTGTCCAGACCCAGGCCCTAACCTGCCGCCTCGACCTCTCCGACGAGCTCTTCGGCGGCGTCAAGGATGCCTGCGGCAAGGACCTCGACCGGAGCCGCTGCTGCCCCGTCCTCGCCGCCTGGCTCTTCGCCGCTCACGCCCGCACCGCTCTTGATGTCTCCGCCGCCCCTCCTCCGTCCTCCGCCGACCTTCCGATGATGCCCGACGACTCCCAAAAATGCGTCAACTCGCTCCAGGATTCGCTTCTCTCCCGCAACATCCGAATCCCTCAGCCCAACGCCACGTGCGACGCTATTCTCTGCTTCTGCGGCATCAGACTCCACCAAATCACGTCGCTTACCTGCAACGCTGCGTTTAACGTCTCGCTTTCTCACAGGAACGCCACCCCAACCGCTGCGGTTCGCAACCTCGAGAATAATTGCCGTAACTCCTCTTACGCTGGTTGCACCAAATGCCTCGGTGCCCTACAAAAGGTGAAGGGGTATAAAAACGAGACGAAGGGAAGTGATAGGGTGAAGAAAATGTTCAACCGGGACTGTCAACTGATGGGGTTAACGTGGCTTCTGGCGAAGAACAAAACGGCGTACATACCTACCGTTTCGGCAGTGCTGCGTGCGATGATGTACAGTGCGCACCCTCACGAGTCCAAGTGTAGTCCTGACCAAGAGAACATGCCGCTGGCCGTTGATTCGCTTCAGTTCGAGAGCGGCCACGCGCCATCTCGGCCGTCCAAGTTTTGCGTGACGGTTTTGCCCCTCGTGGTTCTCTTATTATTTTCCGCTTTTGTGTAG 954 0.5765 MQSFPPIPTLACLYLTFFTSLLFLLPFSRAGLLSEPVSDPNQPLEPGSNTVPAFPVQTQALTCRLDLSDELFGGVKDACGKDLDRSRCCPVLAAWLFAAHARTALDVSAAPPPSSADLPMMPDDSQKCVNSLQDSLLSRNIRIPQPNATCDAILCFCGIRLHQITSLTCNAAFNVSLSHRNATPTAAVRNLENNCRNSSYAGCTKCLGALQKVKGYKNETKGSDRVKKMFNRDCQLMGLTWLLAKNKTAYIPTVSAVLRAMMYSAHPHESKCSPDQENMPLAVDSLQFESGHAPSRPSKFCVTVLPLVVLLLFSAFV* 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso12g0870 317 Pfam SPARK 59 221 IPR043891 -
Gso12g0870 317 PANTHER GPI-ANCHORED PROTEIN 14 310 IPR040376 -
Gso12g0870 317 PANTHER OS07G0557700 PROTEIN 14 310 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso12g0870 Gso-Chr12 9709190 9711638 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso12g0870 - - gmx:100785994 603.979
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g0870 12 9709190 9711638 Gso12g0870 12 9709190 9711638 ECH
Gso12g0870 12 9709190 9711638 Gso6g2461 6 46269240 46271570 GST
Gso12g1688 12 40515672 40517296 Gso12g0870 12 9709190 9711638 PCT
Gso12g0870 12 9709190 9711638 Gso12g1688 12 40515672 40517296 PCT