Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso12g0853 ATGGAGAAGCGATTAATCTCCGTAGACCGTTGGGCAGAGGGAAGCGAAGCGTACTTCCTCACCCACCTCCACTCCGACCACACCCACGGCCTCACCCCCTCCTGGCACCACGCCCCCCTCTTCTGCTCCGCCGTCACCGCCAAACTCCTCCCCTTCAAGTTCCCCGGTTTCGACCTCTCCCTCCTCCGCATCCTCCACCCCGGCACCACCCACACCGTCACCCTCCCCTCCCTCACCCTCCACGTCACCGTCATGGACGCCTGTCACTGCCCCGGTTCCATCATGCTCCTTTTCCGCGGCGACTTCGGCTGCATCCTCTACACCGGCGACTTCAGGTGGGAAGCCACGTGCGAGCGAGCAACCAAGTCCCGGCACGTGCTTCGCGACGCGCTCCGGCACGTTCCCGCTGTTGACGTTGTTCACCTTGACAATACCTACTCCAATCCTATCTACGATTTTCCGCCTCGCCATGTCGCGGCTCAGCAGATTATCGATATCATCGCGTCGCATCCCGATCACGAGGTCATTATCGGGATTAACACATTGGGGAAGGAAGATCTGCTGGTTGAGATTTCACGCGCGCTTCAAATCATGATTTGGGTGTGGCCACAGCGGTTGCGGACTATGCATCTTCTTGGTTACGATGATATTTTTACAACGAACACGTCTCTTACTAGAGTTAGAGCAGTTCCTGTATATAGCTTCAGCATCAATACTGTAGAGGAACTAAATTATGTGTGCCCAACTATAGGAATTATGCCATCGGGTCTTCCATGGATAAAGAAATCCCATCAAAAGAATGAGCTTCAAACCGGTTCCTTTTTGACATCTCGTTACAAGAGAGGCAAATTGAGTGCAAATACTGAGACCCAGATTGATAAGCAAATTGTAAAAACAGGATCACCTGAGAAAATTCACAAGTACATTTACACAGTTCCTTACTCTGATCACTCCAATTATGAGGAGATTGAGGATTTTGTAAAGCTTGTCAAACCAACCACCCTCAAGGGTATTGTGTCTTCCTCCTCATGCTATATTGAACCCATGTACTATTTTGGTCGACTTTGTCCTGGTAATCAGCAAACAGATCAGGTGCATGAGGGTTGCAAAGGGAAAGAAAATGGTAAAAGAGAAAGAGAAGAAGCAGTCAGATCCAAAACTTTGTTTGAAGGTGATAATTTTGAGACAGGTAGAGACAGAGGGAAGGCTTTGAAGGGTAGGTTTTCTGGTGTTCATGTGAGTAGGTTGAGTATATTGAGAAAAAAGCGCCGTGGTGCAAAAATTCAGGAACATGATGACAGTTCTGAATCTTGA 1314 0.4924 MEKRLISVDRWAEGSEAYFLTHLHSDHTHGLTPSWHHAPLFCSAVTAKLLPFKFPGFDLSLLRILHPGTTHTVTLPSLTLHVTVMDACHCPGSIMLLFRGDFGCILYTGDFRWEATCERATKSRHVLRDALRHVPAVDVVHLDNTYSNPIYDFPPRHVAAQQIIDIIASHPDHEVIIGINTLGKEDLLVEISRALQIMIWVWPQRLRTMHLLGYDDIFTTNTSLTRVRAVPVYSFSINTVEELNYVCPTIGIMPSGLPWIKKSHQKNELQTGSFLTSRYKRGKLSANTETQIDKQIVKTGSPEKIHKYIYTVPYSDHSNYEEIEDFVKLVKPTTLKGIVSSSSCYIEPMYYFGRLCPGNQQTDQVHEGCKGKENGKREREEAVRSKTLFEGDNFETGRDRGKALKGRFSGVHVSRLSILRKKRRGAKIQEHDDSSES* 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso12g0853 437 Gene3D - 3 336 IPR036866 -
Gso12g0853 437 Gene3D - 152 317 - -
Gso12g0853 437 Pfam DNA repair metallo-beta-lactamase 217 334 IPR011084 -
Gso12g0853 437 PANTHER PROTEIN ARTEMIS 5 391 - -
Gso12g0853 437 SUPERFAMILY Metallo-hydrolase/oxidoreductase 16 335 IPR036866 -
Gso12g0853 437 PANTHER DNA CROSS-LINK REPAIR PROTEIN PSO2/SNM1-RELATED 5 391 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso12g0853 Gso-Chr12 9357662 9360258 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso12g0853 K15341 - gmx:100775842 890.182
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g0853 12 9357662 9360258 Gso12g0853 12 9357662 9360258 ECH