Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso12g0805 ATGGGTTGCTCCATAAGAGAGTGTTGTGTCTTATTTTTGGTTTTGTTGGTGTCATGTGCTAGAGGGGAAGACCCTTATAGATTCTACACTTGGAATGTTACATATGGAGACATTTATCCACTTGGTGTTAAACAACAGGGGATTTTGATAAACTGGCAATTCCCAGGGCCACAAATTGAAGCTGTGACCAATGACAACTTGATTATCAATGTTTACAACAGCTTGGATGAACCTTTCCTCTTATCTTGGAATGGAGTTCTGCAGAGGAGAAACTCATGGCAGGATGGAGTGTATGGTACCAATTGTCCAATTCTACCAGGGCATAACTTCACTTATGTTCTTCAAGTGAAGGATCAGATAGGTAGCTACTTCTACTACCCTTCCCTTGCATTCCACAAGGCAGCAGGAGGTTATGGTGGATTCAAAATTGAGAGCCGCCCCGGGATTCCGGTGCCTTTTCCTCCTCCAGCAGGAGATTTCACGATATTGGCAGGAGACTGGTACAAGAGAAATCACACAGATTTGAGGGCTATTTTGGATGGTGGAAGTGACCTTCCCTTCCCTGATGGGATTATCATCAATGGACGTGGTTCCAATGCCTACACATTTACAGTTGATCAAGGCAAGACGTACAGATTCAGGATATCAAATGTGGGACTCACTTCTTCCATCAACTTTAGAATCCAAGGGCATAAAATGACAATTGTTGAGGTGGAAGGGACCCACACTCTCCAAAACATTTATGATTCACTTGATGTTCATCTAGGGCAGACTTACTCTGTGTTGGTTACTGCTGATCAACCACCCCAAGACTACCTCATTGTTGTCACAACACGATTCACCTCCCAAGTGTTGAATGCTACCTCCATTTTTCGTTATAGTAACTCTGGTGGAGGTGTTACTGGCCTTTTTCCTTGGGGGCCAACTATTCAAGTTGATTGGTCTTTAAACCAAGCTCGCTCTCTTAGGAGGAATTTGACAGCAAGTGGGCCAAGACCTAATCCACAAGGATCATACCATTATGGTTTGATAAACACAACTCGAACAATTAGACTTCAAAATTCTGCTCCAGTTATCAATGGCAAACAGAGATACGCTGTCAATAGTGTGTCCTTCATACCTGCTGATACACCACTTAAACTGGCTGATTACTACAAGATTCAAGGGGTGTTCTCCCTTGGAAGTATCCCTGACTACCCCACTGGTAGTGGTGGTTACCTTCAAACTTCTGTCATGGAAGCCGATTTTCGAGGCTTTGTGGAGGTTGTGTTTGAGAACACTGAAGACACTGTGGAGTCATGGCACGTTGATGGCCACAGCTTCTTTGTAGTAGGAATGGATGGAGGTCAATGGTCATCAGCAAGCAGGCTAAATTACAATTTAAGAGATACAATTTCTCGTTCCACAGTTCAGGTGTATCCCAAGTCATGGACTGCAATTTACATGCCTTTGGATAATGTGGGAATGTGGAATGTGAGGTCTGAGAATTGGGTTCATCAGTATTTGGGCCAGCAATTTTATCTTAGAGTGTATTCCCCTGCAAATTCATGGAGAGATGAGTACCCAATTCCAAGTAATGCTATTCGGTGTGGCAAGGCTGTGGGCCACTATTAA 1614 0.4362 MGCSIRECCVLFLVLLVSCARGEDPYRFYTWNVTYGDIYPLGVKQQGILINWQFPGPQIEAVTNDNLIINVYNSLDEPFLLSWNGVLQRRNSWQDGVYGTNCPILPGHNFTYVLQVKDQIGSYFYYPSLAFHKAAGGYGGFKIESRPGIPVPFPPPAGDFTILAGDWYKRNHTDLRAILDGGSDLPFPDGIIINGRGSNAYTFTVDQGKTYRFRISNVGLTSSINFRIQGHKMTIVEVEGTHTLQNIYDSLDVHLGQTYSVLVTADQPPQDYLIVVTTRFTSQVLNATSIFRYSNSGGGVTGLFPWGPTIQVDWSLNQARSLRRNLTASGPRPNPQGSYHYGLINTTRTIRLQNSAPVINGKQRYAVNSVSFIPADTPLKLADYYKIQGVFSLGSIPDYPTGSGGYLQTSVMEADFRGFVEVVFENTEDTVESWHVDGHSFFVVGMDGGQWSSASRLNYNLRDTISRSTVQVYPKSWTAIYMPLDNVGMWNVRSENWVHQYLGQQFYLRVYSPANSWRDEYPIPSNAIRCGKAVGHY* 538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso12g0805 537 PANTHER L-ASCORBATE OXIDASE HOMOLOG 9 533 - -
Gso12g0805 537 Gene3D - 342 535 IPR008972 -
Gso12g0805 537 SUPERFAMILY Cupredoxins 23 173 IPR008972 -
Gso12g0805 537 SUPERFAMILY Cupredoxins 153 333 IPR008972 -
Gso12g0805 537 CDD CuRO_3_AAO_like_1 374 496 IPR034275 GO:0005507
Gso12g0805 537 Pfam Multicopper oxidase 377 511 IPR011706 GO:0005507|GO:0016491
Gso12g0805 537 CDD CuRO_1_AAO_like_1 28 143 IPR034273 GO:0005507
Gso12g0805 537 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 19 - -
Gso12g0805 537 Pfam Multicopper oxidase 33 146 IPR011707 GO:0005507
Gso12g0805 537 Gene3D - 158 330 IPR008972 -
Gso12g0805 537 Pfam Multicopper oxidase 159 295 IPR001117 -
Gso12g0805 537 SUPERFAMILY Cupredoxins 343 533 IPR008972 -
Gso12g0805 537 PANTHER MULTI-COPPER OXIDASE 9 533 IPR045087 -
Gso12g0805 537 Gene3D - 26 147 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso12g0805 Gso-Chr12 8428205 8433163 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso12g0805 - - gmx:100775285 1104.35
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g0805 12 8428205 8433163 Gso12g0805 12 8428205 8433163 ECH
Gso12g0805 12 8428205 8433163 Gso6g2521 6 46964602 46969953 GST