Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso12g0795 ATGATTTCTCAACTTGGTTGTGGATATAAAGCTCTTATTCCAGATCTCTACAGAGGAAAGGTTGGTCTGGATGTTGCAGAAGCACAACATTTGTTTGATGGTCTTGATTGGCAAGGTGTTGTAAAAGATATCAGTGCTTCCATTAACTGGCTTAAGGCAAATGGTTCAAAGAAGGTTGGTGTTACTGGATTTTGTATGGGGGGTGCTCTCTCTGTTACAAGCTCAGTCTTGGTTCCAAATGTTGATGCTGCTGTAGCTTTTTATGGAGTTCCTTCTTCTGAGCTTGCAGACCCTGCCCAAGCCAAGGCTCCTATTCAGGCCCACTTTGGAGAGCTGGATAATTTTGCTGGATTTTCAAATGTTACAACTGCCAAGGCCTTGGAGGAGAAGCTGAAAACATCTGGTTTTCCACATGAGATACACATATATCCTGGCAATGGACATGCATTCATGCACAGGTCTCCAGAAGGAATCAAGAGGAGGAAGAGCATAGGAATGCCCGACGAAGACGAAGCCGCAGTTCAGCTCGCATTGTCTCGCTTTCAGTCATGGATGACACATTATTTATCCAGCTAA 576 0.4427 MISQLGCGYKALIPDLYRGKVGLDVAEAQHLFDGLDWQGVVKDISASINWLKANGSKKVGVTGFCMGGALSVTSSVLVPNVDAAVAFYGVPSSELADPAQAKAPIQAHFGELDNFAGFSNVTTAKALEEKLKTSGFPHEIHIYPGNGHAFMHRSPEGIKRRKSIGMPDEDEAAVQLALSRFQSWMTHYLSS* 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso12g0795 191 Gene3D alpha/beta hydrolase 5 189 IPR029058 -
Gso12g0795 191 Pfam Dienelactone hydrolase family 5 188 IPR002925 GO:0016787
Gso12g0795 191 PANTHER CARBOXYMETHYLENEBUTENOLIDASE-RELATED 2 189 - -
Gso12g0795 191 PANTHER BNAC04G12290D PROTEIN 2 189 - -
Gso12g0795 191 SUPERFAMILY alpha/beta-Hydrolases 7 189 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso12g0795 Gso-Chr12 8297581 8305578 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso12g0795 K01061 - gmx:100799250 354.755
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g0795 12 8297581 8305578 Gso12g0795 12 8297581 8305578 ECH
Gso12g0795 12 8297581 8305578 Gso6g2529 6 47021485 47030396 GST
Gso12g1624 12 39789513 39793647 Gso12g0795 12 8297581 8305578 PCT
Gso12g0795 12 8297581 8305578 Gso12g1624 12 39789513 39793647 PCT