Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso12g0719 ATGGTTTCAAGAGCAGCAATAGTGTTACTCATAGGTCTTGTGGGAATGTTTTACCAGGGCACTCAACTCCCCCCTCCAAACAACAGTGATTCATCAGATGATGGTGTTCCAGTTTCACCACCAAGAGTCAGACTCAGAGATGGGAGGTACTTGGCTTATAGAGAAAAGGGTGTCCCCAAGGACCAAGCAAAACACAGCATCATCATTGTACATGGCTTTGGAAGCTCCAAAGATATGAATTTTCTGGCACCCCAAGAACTAATAGATGAATTGGGTATATATATTCTGCAATATGATCGAGCTGGGTATGGAGAGAGTGATCCAAACCCCAAACGCTCACTGAAAAGTGAAGCACTTGACATTGAAGAGCTTGCTGATCTGTTACAGATAGGGTCAAAATTTTATTTGATTGGTGTCTCAATGGGATCATATGCTACATGGAGTTGTTTGAACTACATCCCCAACAGGCTAGCAGGTGTGGCTATGATAGCTCCAGTGATAAATTATCTATGGCCTTCCTTCCCTGAGAGTCTGATAAAAGAGGACTATAGGAGGAAACTTATCAAGTGGTCCATGTGGTTTGCAAACTATTTTCCTAGATTGTTGTACTGGTGGGTGACTCAAAAGTGGCTCCCTTCAAATTCTGTCATAGAAAAAAACCCAGCTTTCTTCAACAAAAGAGATATAGATATTTTAGAGACAATTCCTGGCTTCCCAATGCTTACCAAGAACAAATTAAGGGAACAAGTTGTTTTTGACACTCTAAGGGGTGACTGGATGGTGGCCTTTGGCAACTGGGAATTTGACCCTCTGAAGCTAAGTAATCCATTCCCTGATAATAGAAGTTCAGCTCACATTTGGCAGGGCTATGAAGATAAGGTAGTGCCCTCTCAAATCCAAAGGTTTGTTACACAGAAGCTGCCTTGGATACAATATCATGAAGTTCCAGATGGTGGCCATTTGATTGTGCACTATAGTGGCTTATGTGAGGCCATTCTGAAGGCACTTTTACTTGGAGAAGAAAATCTTTCATATAGACCTAGACCAGAAGTATTTGTATCTTGA 1065 0.4178 MVSRAAIVLLIGLVGMFYQGTQLPPPNNSDSSDDGVPVSPPRVRLRDGRYLAYREKGVPKDQAKHSIIIVHGFGSSKDMNFLAPQELIDELGIYILQYDRAGYGESDPNPKRSLKSEALDIEELADLLQIGSKFYLIGVSMGSYATWSCLNYIPNRLAGVAMIAPVINYLWPSFPESLIKEDYRRKLIKWSMWFANYFPRLLYWWVTQKWLPSNSVIEKNPAFFNKRDIDILETIPGFPMLTKNKLREQVVFDTLRGDWMVAFGNWEFDPLKLSNPFPDNRSSAHIWQGYEDKVVPSQIQRFVTQKLPWIQYHEVPDGGHLIVHYSGLCEAILKALLLGEENLSYRPRPEVFVS* 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso12g0719 354 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 1 347 - -
Gso12g0719 354 Pfam Alpha/beta hydrolase family 67 322 IPR000073 -
Gso12g0719 354 PANTHER HYDROLASE, ALPHA/BETA FOLD FAMILY PROTEIN, EXPRESSED-RELATED 1 347 - -
Gso12g0719 354 Gene3D alpha/beta hydrolase 32 337 IPR029058 -
Gso12g0719 354 SUPERFAMILY alpha/beta-Hydrolases 35 323 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso12g0719 Gso-Chr12 7276991 7279399 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso12g0719 61 323 Acyl Lipid Metabolism Gene Families AT1G64670 22.662 4.98e-07 49.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso12g0719 - - gmx:100803294 701.049
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g1552 12 38996048 38999162 Gso12g0719 12 7276991 7279399 PCT
Gso12g0719 12 7276991 7279399 Gso12g1552 12 38996048 38999162 PCT