Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso12g0714 ATGGGAAAACGAGAGAAGCAGAAGCAGAGGCACGAGAAGGGACACCGTGGAAGAGGGTCTTTCAACTATCTTCAAGAGGACCATGATTTTGATGACACTCCAAGACCCTCACCATCTGAAGAAGAATGTGCTGATGACAGCAATGAGGAAAAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGGTCATGAAAACCAATCTCATGATATGCCTTCCAAGTTCCTCCTTTACCAACAATCTGTGCAGTCACCCAAAGGAGATATAAGTTATTTGCAAAAGTTCTTTCTCATGTACGTGGGTGGAAGGATGCCCCTCCATCTTCAAGAAGATTTCTGTGGCACGGCGCTTCTTAGTACAGAATGGCTCCGCAGTGATTCAAGAAGAACAGTAGTAGGATTAGATTTGGATCTTGAGGCACTCAATTGGTGCATGGAAAGCAACATACCTAAAGTTGGGGCTGATGGATTTTCAAGAATGTCTCTCTTTCATGGGAATGTCCTACAACCTCTTCAGTCTAAACTTGTAAAAATAGATCCTCAGCAGCTGGTAAGTGACATTTCACTGTCACAGAATGAAGAAAATCTTCAGACTGATGTGCCAGAATCTGATGCTCCAACAGGCTCTGTTGCTCAAGATGACAAGTATACTAAGAGAAACATAATACTGCCTGGAAGAGATATCGTGTGTGCTTTTAACTACAGCTGCTGTTGTCTACATAAACGAGCAGAACTGGTTCTGTATTTCAAGCATGCTCGTGAGGCCTTGTCAACTAAAGGTGGAATTTTTGTGATGGATTTATATGGGGGTACGTCATCAGAGCACAAGTTGAGGCTTCAGAGAAGATTTCCCAATTTTACGTATGTATGGGAGCAAGCTGAATTTGATATTATTCAACGGAAGACAAGGATTAGCCTCCATTTTCATATGAAGAAGGAACAAAGAAAACTTCGCCATGCATTTTCATACAGCTGGCGGTTGTGGACATTGCCTGAAATTAGGGATTGCCTAGAAGAGGCTGGATTTCGGTCTGTTCACTTTTGGGTTCGAGAGATGCCAGACACCACAGAAATTATGAGAACAGAGGGGTTTGGTGCGGGAAAGAATGTAAAATATGAAGAGGCTACAAGTTTTCAGCAACAAGATTCTTGGAATGCTTACATAGTTGGTGTTGCGTAA 1173 0.4228 MGKREKQKQRHEKGHRGRGSFNYLQEDHDFDDTPRPSPSEEECADDSNEEKEEEEEEEEEGHENQSHDMPSKFLLYQQSVQSPKGDISYLQKFFLMYVGGRMPLHLQEDFCGTALLSTEWLRSDSRRTVVGLDLDLEALNWCMESNIPKVGADGFSRMSLFHGNVLQPLQSKLVKIDPQQLVSDISLSQNEENLQTDVPESDAPTGSVAQDDKYTKRNIILPGRDIVCAFNYSCCCLHKRAELVLYFKHAREALSTKGGIFVMDLYGGTSSEHKLRLQRRFPNFTYVWEQAEFDIIQRKTRISLHFHMKKEQRKLRHAFSYSWRLWTLPEIRDCLEEAGFRSVHFWVREMPDTTEIMRTEGFGAGKNVKYEEATSFQQQDSWNAYIVGVA* 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso12g0714 390 Gene3D - 267 325 - -
Gso12g0714 390 PANTHER EXPRESSED PROTEIN 1 390 - -
Gso12g0714 390 MobiDBLite consensus disorder prediction 16 42 - -
Gso12g0714 390 Coils Coil 40 68 - -
Gso12g0714 390 MobiDBLite consensus disorder prediction 1 15 - -
Gso12g0714 390 MobiDBLite consensus disorder prediction 43 62 - -
Gso12g0714 390 MobiDBLite consensus disorder prediction 1 69 - -
Gso12g0714 390 Gene3D Vaccinia Virus protein VP39 226 345 IPR029063 -
Gso12g0714 390 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 109 353 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso12g0714 Gso-Chr12 7207371 7210901 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso12g0714 - - gmx:100801710 765.377
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g0714 12 7207371 7210901 Gso11g1395 11 15991039 15994709 GST