Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso12g0668 ATGAACCTCTCTCTATGCAATTCTTCAAACCTTAACACCTCAAGAAAACCATTGATGGCACTCCCTCACTCCATCTCTGCCTTAGCCACCACACTCACACTCTCCTCGCCAACAACCAAACCCCAGAAAGTTAACCCCTTTCCCTTTTTCTCGAACCAAAAGACACGATTTTTAACGAAACAAACGCGACCCAGAAGCAGAAGAAGCCTCTCTCTAACCCCTGCACGCGTTGCGGCGCCACCCTCAACTGTTGAAGCCGATCAATCATACCCGGAGACCGAAAATAACGAAACTGAGGAAGAGTTTAACGATGAAAGCTCTTATTCTAAATTCACTTGGAGGGATCACTGGTACCCTGTTTCGTTGATCGAAGATCTGAACCCTCTCTTGCCCACACCGTTTCAGCTTCTGGGTCGTGAAATCGTGCTCTGGTACGACAAGTCCATTTCCCAATGGGTTGCTTTTGATGACAAATGCCCCCATCGTCTTGCCCCTTTGTCTGAAGGGAGGATTGATGAAGATGGGAAGTTGCAGTGTTCTTATCATGGGTGGTCTTTTGATGGGTGTGGATCTTGTGTTAAGATACCTCAGGCTGCATCTGAAGGCCCCGAAGCACGTGCTATTGGATCTCCTAAAGCGTGTGCCACTAGGTTCCCTACCATGGTGTCTCAGGGCTTGCTCTTCGTTTGGCCTGATGAGAATGGTTGGGAGAAAGCAAAGGCCTCCAAGCCTCCAATGTTGCCTGATGACTTTGACAAACCGGAGTTTGCCACGGTCAACATTCAGCGTGATCTGTTCTATGGTTACGATACTCTCATGGAGAATGTCTCTGATCCTTCTCACATTGAGTTTGCTCATCACAAGGTCACAGGAAGGAGAGACAGAGCCAAGCCTCTGCCATTCAAGATGGATTCTCGTGGTTCATGGGGCTTCTCTGGAGCTAATGAAGGGAACCCACAGATCAGTGCCAAGTTTGTTGCACCATGTTATATGATGAACAAGATTCAGATTGATACCAAACTCCCTGTAGTTGGTGACCAGAAATGGGTAGTATGGATATGTTCCTTCAATGTCCCCATGGCACCCGGTAAGACTCGCTCCATAGTTTGCAGTGCTCGAAACTTCTTCCAGTTCTCAGTGCCAGGGCCAGCCTGGTGGCAAGTCGTTCCTAGATGGTATGAGCATTGGACTTCAAACAAGGTATATGATGGAGACATGATTGTTCTTCAAGGCCAAGAGAAAATCTTCCTTTCAGAAACCAAGGAAGGTGGAGACATTAACAAACAGTATACAAACATCACCTTCACACCAACACAGGCAGATCGCTTTGTCTTGGCATTTCGAAACTGGCTAAGGCGGCATGGCAATGGCCAACCAGAATGGTTTGGCAACAGCAGCGACCAACCATTGCCATCAACTGTTTTATCAAAACGTCAGATGTTGGATAGATTTGAACAGCACACTCTCAAGTGTTCATCATGTAAAGCAGCATATGAGGGATTCCAAACATGGCAGAAAGTCCTAATTGGTACAACAGTTGTGTTTTGTGCAACATCAGGGATCCCATCAGATGTCCAGTTGCGTGTACTTTTGGCTGGACTCGCAATTGTCAGTGCAGCCATAACTTTTGCCCTAAATCAACTCCAAAAGAATTTTGAATTCGTGGATTACGTGCATGCCGAAATTGATTAA 1692 0.4663 MNLSLCNSSNLNTSRKPLMALPHSISALATTLTLSSPTTKPQKVNPFPFFSNQKTRFLTKQTRPRSRRSLSLTPARVAAPPSTVEADQSYPETENNETEEEFNDESSYSKFTWRDHWYPVSLIEDLNPLLPTPFQLLGREIVLWYDKSISQWVAFDDKCPHRLAPLSEGRIDEDGKLQCSYHGWSFDGCGSCVKIPQAASEGPEARAIGSPKACATRFPTMVSQGLLFVWPDENGWEKAKASKPPMLPDDFDKPEFATVNIQRDLFYGYDTLMENVSDPSHIEFAHHKVTGRRDRAKPLPFKMDSRGSWGFSGANEGNPQISAKFVAPCYMMNKIQIDTKLPVVGDQKWVVWICSFNVPMAPGKTRSIVCSARNFFQFSVPGPAWWQVVPRWYEHWTSNKVYDGDMIVLQGQEKIFLSETKEGGDINKQYTNITFTPTQADRFVLAFRNWLRRHGNGQPEWFGNSSDQPLPSTVLSKRQMLDRFEQHTLKCSSCKAAYEGFQTWQKVLIGTTVVFCATSGIPSDVQLRVLLAGLAIVSAAITFALNQLQKNFEFVDYVHAEID* 564
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso12g0668 563 SUPERFAMILY Bet v1-like 224 459 - -
Gso12g0668 563 CDD Rieske_RO_Alpha_PaO 105 239 - -
Gso12g0668 563 SUPERFAMILY ISP domain 110 233 IPR036922 GO:0051537
Gso12g0668 563 MobiDBLite consensus disorder prediction 60 104 - -
Gso12g0668 563 Gene3D - 112 254 IPR036922 GO:0051537
Gso12g0668 563 PANTHER PHEOPHORBIDE A OXYGENASE, CHLOROPLASTIC 35 563 - -
Gso12g0668 563 Pfam Rieske [2Fe-2S] domain 116 199 IPR017941 GO:0051537
Gso12g0668 563 ProSiteProfiles Rieske [2Fe-2S] iron-sulfur domain profile. 117 229 IPR017941 GO:0051537
Gso12g0668 563 Pfam Pheophorbide a oxygenase 325 420 IPR013626 GO:0010277
Gso12g0668 563 PANTHER IRON-SULFUR DOMAIN CONTAINING PROTEIN 35 563 - -
Gso12g0668 563 Gene3D - 255 458 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso12g0668 Gso-Chr12 6534649 6539761 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso12g0668 K13071 - gmx:778121 1132.47