Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso12g0640 ATGCAGGCTGGCTTGTGTTTTTTGCTTATTATCATATACAATTGTTCTGACCAAGTTCTTGCAACTCGAGAAAAAAGACAAGCAAAATCAAGAGAAAGGGCTGCACAAAGTGTGCGAGAATCACAAGCACGTGAAAAATGGAAATCTGCAAAAGACGTGGCTAAAAAACATGCAGTAGGACTACAGTCACAATTGTCACGTACATTTTCTCGCAAAACTTCAAAGAAGCCAGATTTGAAAGGTGCTGCTTTACCACCTGTTGGTACATCAAAAGGAAAGAAAAAGGACAAAAATAATCTCTCAAAAATAATAAATGACATTGAGGAAAATCCTGATAGTTCAGAAGGGTTTAATGTTCAGATAGGAGATAAAAATGTCAAGAAACAAGCACCAAGGGGTAAGCAATTGCACACTCAAAGTCAAATTTTCAAGTATGCATATGGTCAGATTGAAAAAGAGAAGGCTTTAGCAGAACAAAACAAAAACTTAACCTTTTCTGGAGTAATTTCAATGGCTAATGACATTGAGATAAGGAAGAGACCTACCATTGAGGTTGCTTTCAAAGACTTAACCCTCACTTTGAAAGGGAAAAACAAACATTTATTGAGATGTGTGACTGGTAAATTACATCCTGGTAGAGTTTCAGCAGTCATGGGGCCATCTGGGGCTGGCAAGACAACATTTCTTTCAGCTTTAACTGGAAAAGCAACTGGGTGCCACACAACTGGGCAAGTTCTTGTAAATGGTAAAGAATCTTCTATCAGGTCATACAAGAAAATCATTGGGTTTGTGCCACAAGATGATATTGTGCATGGCAATTTGACAGTGGAGGAAAATCTATGGTTTAGTGCTAGATGCAGACTCTCTGCTGATCTACCAAAAGAAGAGAAGGTGTTAGTGGTTGAAAGAGTCATTGAGTCATTAGGTCTACAAGCAATAAGAGATTCTTTAGTTGGGACAGTGGAGAAACGAGGAATCTCGGGAGGTCAAAGGAAAAGAGTAAATGTTGGATTGGAAATGGTTATGGAACCTTCCCTTTTAATTTTGGACGAACCCACTTCTGGATTGGATAGTTCATCTTCTCAATTACTACTTAGAGCACTTAGACGTGAAGCTCTTGAGGGAGTAAACATATGTATGGTCCTTCACCAACCAAGTTACACCTTGTTCAAGATGTTTGACGATTTTATACTACTTGCAAAGGGAGGTCTTACAGTGTATCATGGACCAGTGAACAAAGTAGAAGAGTATTTTTCAAGCATGGGCATTAATGTCCCTGACCGTGTTAACCCTCCAGATTACTTCATTGACATTTTAGAAGGAATAGTAAAATTAAGCCCGAGCTTAGGAGTGAACTATAAACAACTACCTGTTAGATGGATGCTTCATAATGGGTACCCTGTGCCCATGGATATGCTAGCAACTATGGAAGGAATGGCCGCGCCAAGTGGTGAAGGTTCATCACATGGAGCAGCAACTGCTACACAAAACAATGAGGCACCTTCTTTTGCTGGAGAACTTTGGCAGGATGTGAAGTGCAATGTTGAGATGAAAAAGGATATCCTTCACCTTAACTTCTTAAGCTCAAATGATTTGTCTAATCGAATAACACCAGGAGTGTTCAACCAATACAAATACTTTCTTGGAAGAGTTGGTAAGCAGCGACTAAGAGAAGCTAGAACACAGGCTGTGGATTTTTTGATTTTGCTATTAGCTGGCCTTTGCTTAGGAACACTTGCTAAAGTGAGTGATGAATCATTTGGAGCAACTGGTTACACATACACTGTAATAGCAGTATCTCTCCTTTCTAAAATTGCGGCTTTAAGATCATTCTCATTGGATAAGTTGCACTACTGGCGAGAAAGTTCTTCAGGCATGAGTAGTTTGGCTTACTTTCTATCAAAGGATACCGTCGACCATTTTAGCACAATTATCAAGCCACTAGTTTACCTTTCAATGTTTTATTTCTTCAACAATCCAAGATCTTCAGTCACAGATAACTACATGGTTCTGTTGTGTTTAGTCTATTGTGTCACTGGCATAGCTTATGTGTTAGCAATCTTTCTTCAACCAGGTCCAGCCCAATTGTGGTCAGTGTTACTTCCAGTAGTTTTGACTTTGGTAGCAACCTATAGCAGTGAAAAAGATAGCAAATATATAAAATTTCTATCTGACTTGTGCTACACCAAGTGGGCTCTTGAAGCATTTGTAATATCAAATGCTAAAAGATACACTGGAGTTTGGTTATTAAGTCGATGTGGTGCACTCTATACTAATGGCTATGATCTTAAACATTGGTACCAATGTTTAGGCCTTCTTATCGTAACGGGAATCATTAGTCGCATGCTTGCATTTTTCTGTATGATAACCTTCCAGAAGAAATAG 2385 0.3895 MQAGLCFLLIIIYNCSDQVLATREKRQAKSRERAAQSVRESQAREKWKSAKDVAKKHAVGLQSQLSRTFSRKTSKKPDLKGAALPPVGTSKGKKKDKNNLSKIINDIEENPDSSEGFNVQIGDKNVKKQAPRGKQLHTQSQIFKYAYGQIEKEKALAEQNKNLTFSGVISMANDIEIRKRPTIEVAFKDLTLTLKGKNKHLLRCVTGKLHPGRVSAVMGPSGAGKTTFLSALTGKATGCHTTGQVLVNGKESSIRSYKKIIGFVPQDDIVHGNLTVEENLWFSARCRLSADLPKEEKVLVVERVIESLGLQAIRDSLVGTVEKRGISGGQRKRVNVGLEMVMEPSLLILDEPTSGLDSSSSQLLLRALRREALEGVNICMVLHQPSYTLFKMFDDFILLAKGGLTVYHGPVNKVEEYFSSMGINVPDRVNPPDYFIDILEGIVKLSPSLGVNYKQLPVRWMLHNGYPVPMDMLATMEGMAAPSGEGSSHGAATATQNNEAPSFAGELWQDVKCNVEMKKDILHLNFLSSNDLSNRITPGVFNQYKYFLGRVGKQRLREARTQAVDFLILLLAGLCLGTLAKVSDESFGATGYTYTVIAVSLLSKIAALRSFSLDKLHYWRESSSGMSSLAYFLSKDTVDHFSTIIKPLVYLSMFYFFNNPRSSVTDNYMVLLCLVYCVTGIAYVLAIFLQPGPAQLWSVLLPVVLTLVATYSSEKDSKYIKFLSDLCYTKWALEAFVISNAKRYTGVWLLSRCGALYTNGYDLKHWYQCLGLLIVTGIISRMLAFFCMITFQKK* 795
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso12g0640 794 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 3 791 - -
Gso12g0640 794 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 185 426 IPR003439 GO:0005524
Gso12g0640 794 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 186 422 IPR027417 -
Gso12g0640 794 PANTHER ABC TRANSPORTER G FAMILY MEMBER 24 3 791 - -
Gso12g0640 794 CDD ABCG_EPDR 183 409 - -
Gso12g0640 794 Gene3D - 173 425 IPR027417 -
Gso12g0640 794 Pfam ABC transporter 204 354 IPR003439 GO:0005524
Gso12g0640 794 ProSitePatterns ABC transporters family signature. 326 340 IPR017871 GO:0005524
Gso12g0640 794 SMART AAA_5 211 412 IPR003593 -
Gso12g0640 794 MobiDBLite consensus disorder prediction 29 55 - -
Gso12g0640 794 MobiDBLite consensus disorder prediction 29 99 - -
Gso12g0640 794 Pfam ABC-2 type transporter 383 794 IPR043926 GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso12g0640 Gso-Chr12 6084493 6088327 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso12g0640 212 407 Calmodulin-binding Proteins AT2G36910 29.302 4.58e-11 64.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso12g0640 - - gsj:114380307 1518.83
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g0640 12 6084493 6088327 Gso11g1485 11 17275446 17281094 GST