Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso12g0587 ATGGCGTTCAGAGGGAAAGAGATGATGAAGAAAGTTCTGAAGACGGTGGGAGAGAACGGTCTGAGTCGAAGAGAAAAGGAATCGTTGGAGAGATGCTTGCCTCGAAGCAAGATTGTGATGAATCGCGCCAAACGCGGTCTCTTCGCCGGGAAACACATTCAGTTTGGGAATCGTGTCAGTGAAGATGGCGGTAACAAGTCAAGGAGAACTTGGAAACCTAATGTCCAGGAAAAACGGCTCTTTAGTTATATCCTAGATCGTCACGTTCGTGTTAAAGTCACCACCCATGCCCTACGATGCATAGACAAGGCAGGTGGGATTGATGAGTACTTGCTGAAAACTCCTTATCACAAGATGGACACTGAAATGGGCATCCTTTGGAAGGCTAAGATTGAGAAGTTGTATGAAGAGCTTGGCAATAAGGAGGTTGTATTCTTTTCACCCGAGGATGAAGTGAAGTTTGAGCAGGAGTTTGAAGATTTGAAACTATCTGAAAGGGAAGCACGAAAGGAGGTAAGAAGAAAAATGTACACTGGGATGAGCAAGCAAAAGCTAATTGAGGTAGAACGTAAAGATGATCAATGTATTGACGAGGGAGGCAATAAAATTGAGGGAGAAATCTCGCATGATTCATCAAAACAGGTGGTTCCTGTCTCGTATGTCTTGGCTGCTGACAAGCTCAAAGTTGGAAGTGTTGTTTCTAATTAA 708 0.4393 MAFRGKEMMKKVLKTVGENGLSRREKESLERCLPRSKIVMNRAKRGLFAGKHIQFGNRVSEDGGNKSRRTWKPNVQEKRLFSYILDRHVRVKVTTHALRCIDKAGGIDEYLLKTPYHKMDTEMGILWKAKIEKLYEELGNKEVVFFSPEDEVKFEQEFEDLKLSEREARKEVRRKMYTGMSKQKLIEVERKDDQCIDEGGNKIEGEISHDSSKQVVPVSYVLAADKLKVGSVVSN* 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso12g0587 235 Hamap 50S ribosomal protein L28 [rpmB]. 42 110 IPR001383 GO:0003735|GO:0005840|GO:0006412
Gso12g0587 235 Gene3D Ribosomal protein L28/L24 47 118 IPR037147 GO:0003735
Gso12g0587 235 Pfam Ribosomal L28 family 45 104 IPR026569 GO:0003735
Gso12g0587 235 PANTHER 39S RIBOSOMAL PROTEIN L28, MITOCHONDRIAL 1 183 IPR026569 GO:0003735
Gso12g0587 235 SUPERFAMILY L28p-like 43 119 IPR034704 -
Gso12g0587 235 PANTHER BNAC03G67590D PROTEIN 1 183 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso12g0587 Gso-Chr12 5286140 5295517 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso12g0587 K02902 - gmx:102663308 469.929
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g0587 12 5286140 5295517 Gso11g1255 11 11602749 11605899 GST