Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso12g0577 ATGTTGAAGAAGCAATCTGTCTTGTCCTTCTCACTAGTAATGCTAATTTCATTTATGTATTCGACAACCACCTTAGCCCAATTATCACCAGCTTCAGCCCCTCTCAAACCGCCCCAACCTGCTCCTACCATACCAGCTGCGGCTCCTCAACAACCATTGGTTCCCTCATTGCCACAGTCACCAAGTGATTCCACTCCTGAAAGTACTCCAGCACTTGACATTGTTGGAATCCTGAGGAAGGCAAAGTCATTCAACATCCTAATCCGTCTCATGAAAACCACCCAATTGATCAACCAACTCAATGCACAGCTCCTCACTACTAAATCAGGTGGCATTACCATTCTTGCACCTGATGACAGTGCCTTCTCAGAACTCAAAGCAGGGTTTCTCAACTCTCTTTCTGATGGGCAAAAGCTCGAGCTCTTACAGTTCCATGTTCTTTCAGACTATGTCTCTAGCTCCAACTTTGATACACTGACGAACCCTGTTAGAACACTAGCAGGGGCTAAACCTGGAAAGGTGGAACTGAATGTGATAAGTTACGGAGGGAGTGTGAACATCTCAACGGGTGAGGTTAACACCACCATCACTGGCATTATATATACCGATAAGCATCTTGCTATTTATAAGGTGGGGAAAGTGCTTCTTCCTATGGACTTCTTTGCAGTTACCAAGGCACCTGCAAAATCACCCTCTTTGGCTCCAGAACCTTCAAGTGACACCGCAAAGGCACCTAAAGCTGATAAGGACGAGTCATCATCTTCAGATTCATCACAGGTTAATCCCACTGAACAGAACTCTGGCACCGAGAAGATCGCTGTGTACGGAATGTGGATGTCACTTGGACTTGGAGCACTTCTCATGAGTGTGATGACAACATAA 882 0.4569 MLKKQSVLSFSLVMLISFMYSTTTLAQLSPASAPLKPPQPAPTIPAAAPQQPLVPSLPQSPSDSTPESTPALDIVGILRKAKSFNILIRLMKTTQLINQLNAQLLTTKSGGITILAPDDSAFSELKAGFLNSLSDGQKLELLQFHVLSDYVSSSNFDTLTNPVRTLAGAKPGKVELNVISYGGSVNISTGEVNTTITGIIYTDKHLAIYKVGKVLLPMDFFAVTKAPAKSPSLAPEPSSDTAKAPKADKDESSSSDSSQVNPTEQNSGTEKIAVYGMWMSLGLGALLMSVMTT* 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso12g0577 293 MobiDBLite consensus disorder prediction 33 56 - -
Gso12g0577 293 MobiDBLite consensus disorder prediction 228 267 - -
Gso12g0577 293 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 1 293 - -
Gso12g0577 293 Pfam Fasciclin domain 83 217 IPR000782 -
Gso12g0577 293 MobiDBLite consensus disorder prediction 30 69 - -
Gso12g0577 293 ProSiteProfiles FAS1/BIgH3 domain profile. 71 215 IPR000782 -
Gso12g0577 293 SMART fasc_3 113 218 IPR000782 -
Gso12g0577 293 SUPERFAMILY FAS1 domain 69 218 IPR036378 -
Gso12g0577 293 Gene3D FAS1 domain 56 217 IPR036378 -
Gso12g0577 293 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 1 293 IPR045003 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso12g0577 Gso-Chr12 5167582 5168771 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso12g0577 - - gmx:100794280 478.018