Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso12g0575 ATGTCATCTAAACCTTCTTTTAACAAAACAAAAACCATGTTGAAGAAGCAATCTGTCTTGTCCTTCTCACTAGTAATGCTAATTTCATTTATGTATTCGACAACCACCTTAGCCCAATTATCACCAGCTTCAGCCCCTCTCAAACCGCCCCAACCTGCTCCTACCATACCAGCTGCGGCTCCTCAACAACCATTGGTTCCCTCATTGCCACAGTCACCAAGTGATTCCACTCCTGAAAGTACTCCAGCACTTGACATTGTTGGAATCCTGAGGAAGGCAAAGTCATTCAACATCCTAATCCGTCTCATGAAAACCACCCAATTGATCAACCAACTCAATGCACAGCTCCTCACTACTAAATCAGGTGGCATTACCATTCTTGCACCTGATGACAGTGCCTTCTCAGAACTCAAAGCAGGGTTTCTCAACTCTCTTTCTGATGGGCAAAAGCTCGAGCTCTTACAGTTCCATGTTCTTTCAGACTATGTCTCTAGCTCCAACTTTGATACACTGACGAACCCTGTTAGAACACTAGCAGGGGCTAAACCTGGAAAGGTGGAACTGAATGTGATAAGTTACGGAGGGAGTGTGAACATCTCAACGGGTGAGGTTAACACCACCATCACTGGCATTATATATACCGATAAGCATCTTGCTATTTATAAGGTGGGGAAAGTGCTTCTTCCTATGGACTTCTTTGCAGTTACCAAGGCACCTGCAAAATCACCCTCTTTGGCTCCAGAACCTTCAAGTGACACCGCAAAGGCACCTAAAGCTGATAAGGACGAGTCATCATCTTCAGATTCGTCACAGGTTAATCCCACTGAACAGAACTCTGGCACCGAGAAGATCGCTGTGTACGGAATGTGGATGTCACTTGGACTTGGAGCACTTCTCATGAGTGTGATGACAACATAA 918 0.451 MSSKPSFNKTKTMLKKQSVLSFSLVMLISFMYSTTTLAQLSPASAPLKPPQPAPTIPAAAPQQPLVPSLPQSPSDSTPESTPALDIVGILRKAKSFNILIRLMKTTQLINQLNAQLLTTKSGGITILAPDDSAFSELKAGFLNSLSDGQKLELLQFHVLSDYVSSSNFDTLTNPVRTLAGAKPGKVELNVISYGGSVNISTGEVNTTITGIIYTDKHLAIYKVGKVLLPMDFFAVTKAPAKSPSLAPEPSSDTAKAPKADKDESSSSDSSQVNPTEQNSGTEKIAVYGMWMSLGLGALLMSVMTT* 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso12g0575 305 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 13 305 - -
Gso12g0575 305 MobiDBLite consensus disorder prediction 45 68 - -
Gso12g0575 305 MobiDBLite consensus disorder prediction 240 279 - -
Gso12g0575 305 ProSiteProfiles FAS1/BIgH3 domain profile. 83 227 IPR000782 -
Gso12g0575 305 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 13 305 IPR045003 -
Gso12g0575 305 MobiDBLite consensus disorder prediction 42 81 - -
Gso12g0575 305 SUPERFAMILY FAS1 domain 81 230 IPR036378 -
Gso12g0575 305 SMART fasc_3 125 230 IPR000782 -
Gso12g0575 305 Gene3D FAS1 domain 68 229 IPR036378 -
Gso12g0575 305 Pfam Fasciclin domain 95 229 IPR000782 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso12g0575 Gso-Chr12 5151722 5152919 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso12g0575 - - gmx:100794280 501.516