Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Gso12g0574 | ATGAAGCAAGCAACTCTTTTCTCCTTCTCACTCTTCCTACTCCTTTCCTCCACCACCATGGCCATTTCACCAGCACCTGCAGCAGCACCAAAAACACCTCCTACCCCAAAGGCAACAGCACCATCACCAAAACCATTAGTTCCCACACTACCTCAGTCTCCAGACTCTCCTGACTCAGTCCCCGACGACATCACCAGAATCCTGAAAAAGGCCAAAATGTTCTCAGTCCTAATCCGCCTCCTCAAAACCACAGAAATCATGAACAACATCAACTCACAGCTCATAACAGCCAAGAGTGGCGGCATAACCATCCTTGCACCAGATGATTCTGCCTTTTCCAACCTCAAAGCAGGCTTCCTCAACTCCCTAAACGAAGGCCAGAAAATCGAATTAGTGCAGTTCCACATATTGCCAGAGTTTGTGTCGAGCTCAAACTTCGATTCCCTAAGCAACCCTGTGCAGACAGTGGCTGGTAAAGACCCTGCAAGGCTTCCGCTGAATGTGAATGCATTAGGTAACAGTGTCAACATTTCAACTGGGGTAGTCAATGCCACCATTCTCGGAGTAGTCTACTCGGATAACAAGCTTGGCATTTATCATGTGGACAAGGTTCTTCTTCCTCTAGATTTCTTTCTAACCAATAAGGCTCCAGCTTTGGCTCCAACAACTCTTGCAAAGGCTCCTAAAGCTGCCAAGGAAAACTCTTCTGACGATGATCAAGAAGAAACAGACCAAAATCACAATAAATCCGGGGCAGTGAGTTTGGTTAGCCTTGGTGGAGCAATGTTGATGTCGATTGGGATAGCTTTGGTCACAGTGGCAACCATGTGGAGTTGA | 837 | 0.4707 | MKQATLFSFSLFLLLSSTTMAISPAPAAAPKTPPTPKATAPSPKPLVPTLPQSPDSPDSVPDDITRILKKAKMFSVLIRLLKTTEIMNNINSQLITAKSGGITILAPDDSAFSNLKAGFLNSLNEGQKIELVQFHILPEFVSSSNFDSLSNPVQTVAGKDPARLPLNVNALGNSVNISTGVVNATILGVVYSDNKLGIYHVDKVLLPLDFFLTNKAPALAPTTLAKAPKAAKENSSDDDQEETDQNHNKSGAVSLVSLGGAMLMSIGIALVTVATMWS* | 279 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Gso12g0574 | 278 | ProSiteProfiles | FAS1/BIgH3 domain profile. | 61 | 205 | IPR000782 | - | |
| Gso12g0574 | 278 | MobiDBLite | consensus disorder prediction | 231 | 246 | - | - | |
| Gso12g0574 | 278 | SUPERFAMILY | FAS1 domain | 40 | 208 | IPR036378 | - | |
| Gso12g0574 | 278 | MobiDBLite | consensus disorder prediction | 224 | 249 | - | - | |
| Gso12g0574 | 278 | Gene3D | FAS1 domain | 49 | 207 | IPR036378 | - | |
| Gso12g0574 | 278 | MobiDBLite | consensus disorder prediction | 25 | 62 | - | - | |
| Gso12g0574 | 278 | Pfam | Fasciclin domain | 73 | 207 | IPR000782 | - | |
| Gso12g0574 | 278 | PANTHER | FASCICLIN DOMAIN PROTEIN | 4 | 278 | - | - | |
| Gso12g0574 | 278 | MobiDBLite | consensus disorder prediction | 27 | 55 | - | - | |
| Gso12g0574 | 278 | PANTHER | FASCICLIN-LIKE ARABINOGALACTAN PROTEIN | 4 | 278 | IPR045003 | - | |
| Gso12g0574 | 278 | SMART | fasc_3 | 103 | 208 | IPR000782 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Gso12g0574 | Gso-Chr12 | 5147719 | 5148885 | Dispersed/Tandem |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Gso12g0574 | - | - | gmx:106794109 | 461.455 |