Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso12g0570 ATGAAGCAAGCAACTCTTTTCTCCTTCTCACTCTTCCTACTCCTTTCCTCCACCACCATGGCCATTTCACCAGCACCTGCAGCAGCACCAAAAACACCTCCTACCCCAAAGGCAACAGCACCATCACCAAAACCATTAGTTCCCACACTACCTCAGTCTCCAGACTCTCCTGACTCAGTCCCCGACGACATCACCAGAATCCTGAAAAAGGCCAAAATGTTCTCAGTCCTAATCCGCCTCCTCAAAACCACAGAAATCATGAACAACATCAACTCACAGCTCATAACAGCCAAGAGTGGCGGCATAACCATCCTTGCACCAGATGATTCTGCCTTTTCCAACCTCAAAGCAGGCTTCCTCAACTCCCTAAACGAAGGCCAGAAAATCGAATTAGTGCAGTTCCACATATTGCCAGAGTTTGTGTCGAGCTCAAACTTCGATTCCCTAAGCAACCCTGTGCAGACAGTGGCTGGTAAAGACCCTGCAAGGCTTCCGCTGAATGTGAATGCATTAGGTAACAGTGTCAACATTTCAACTGGGGTAGTCAATGCCACCATTCTCGGAGTAGTCTACTCGGATAACAAGCTTGGCATTTATCATGTGGACAAGGTTCTTCTTCCTCTAGATTTCTTTCTAACCAATAAGGCTCCAGCTTTGGCTCCAACAACTCTTGCAAAGGCTCCTAAAGCTGCCAAGGAAAACTCTTCTGACGATGATCAAGAAGAAACAGACCAAAATCACAATAAATCCGGGGCAGTGAGTTTGGTTAGCCTTGGTGGAGCAATGTTGATGTCGATTGGGATAGCTTTGGTCACAGTGGCAACCATGTGGAGTTGA 837 0.4707 MKQATLFSFSLFLLLSSTTMAISPAPAAAPKTPPTPKATAPSPKPLVPTLPQSPDSPDSVPDDITRILKKAKMFSVLIRLLKTTEIMNNINSQLITAKSGGITILAPDDSAFSNLKAGFLNSLNEGQKIELVQFHILPEFVSSSNFDSLSNPVQTVAGKDPARLPLNVNALGNSVNISTGVVNATILGVVYSDNKLGIYHVDKVLLPLDFFLTNKAPALAPTTLAKAPKAAKENSSDDDQEETDQNHNKSGAVSLVSLGGAMLMSIGIALVTVATMWS* 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso12g0570 278 ProSiteProfiles FAS1/BIgH3 domain profile. 61 205 IPR000782 -
Gso12g0570 278 MobiDBLite consensus disorder prediction 231 246 - -
Gso12g0570 278 SUPERFAMILY FAS1 domain 40 208 IPR036378 -
Gso12g0570 278 MobiDBLite consensus disorder prediction 224 249 - -
Gso12g0570 278 Gene3D FAS1 domain 49 207 IPR036378 -
Gso12g0570 278 MobiDBLite consensus disorder prediction 25 62 - -
Gso12g0570 278 Pfam Fasciclin domain 73 207 IPR000782 -
Gso12g0570 278 PANTHER FASCICLIN DOMAIN PROTEIN 4 278 - -
Gso12g0570 278 MobiDBLite consensus disorder prediction 27 55 - -
Gso12g0570 278 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 4 278 IPR045003 -
Gso12g0570 278 SMART fasc_3 103 208 IPR000782 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso12g0570 Gso-Chr12 5123247 5124412 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso12g0570 - - gmx:106794109 461.455