Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso12g0569 ATGAAGGATGTTTTGTTCTCCCTCTTACTTTTCATGTCTTTTTGCTCCGTATATTTAACCACAACATTAGCCCAAGCACCTGATACAGCCCCATCAAAACCAATTGTCCAAACACTACCCCAGTCACCCTCTTCAGATACCTCTGATTCTTCCCCTGATGACATCATCAGAATATTAAGGAAGGCCAAATCGTTCAACGTCCTAATTCGCCTACTGAAAACCACCCAATTGATCAACCAAATCAACGCTCAGCTCATAACCATAAGATCAGGTGGCTTAACCATCTTTGCACCAGATGATGGTAGCTTTTCACAACTCAAAGCAGGATTCCTCAACTCTCTGGCCGACAATCAAAAGATCGAACTTCTTCAGTTCCACGTTCTTCCCACTTATGTTTCAAGTTCAAACTTCGATTCGCTGAGCAACCCCGTGAGAACTCTGGCTGGGGATAACCCCGGCAGGTTGCAACTAAACGTGACAGCATATGGCAACAATGTGAATATCTCAACAGGAGTGGTTAATGCCACGGTCACAGGAGTTGTATACTCAGATAAGGTGCTTGCAATATATCATGTGGACAAGGTGCTTCTTCCTTTGGATTTCTTCAAGCCTAAGCCACCAGCTCCTGCTCCCTCTCCTGCAATGGCACCAAAAGCTGATAATGATAACTCATCTGCTGATGCTCGCCTTGGAACATCCAAAGACAGCGCTGGAGCGTGCAGTTTGGTAAGTGCTCAAGGAACATCGTTGGTGTCCCTTGGAGTTGCTTTAGTTGCCTTGCTGATTATTTCAAGTTGA 798 0.4511 MKDVLFSLLLFMSFCSVYLTTTLAQAPDTAPSKPIVQTLPQSPSSDTSDSSPDDIIRILRKAKSFNVLIRLLKTTQLINQINAQLITIRSGGLTIFAPDDGSFSQLKAGFLNSLADNQKIELLQFHVLPTYVSSSNFDSLSNPVRTLAGDNPGRLQLNVTAYGNNVNISTGVVNATVTGVVYSDKVLAIYHVDKVLLPLDFFKPKPPAPAPSPAMAPKADNDNSSADARLGTSKDSAGACSLVSAQGTSLVSLGVALVALLIISS* 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso12g0569 265 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 1 262 IPR045003 -
Gso12g0569 265 Pfam Fasciclin domain 64 198 IPR000782 -
Gso12g0569 265 MobiDBLite consensus disorder prediction 208 232 - -
Gso12g0569 265 PANTHER FASCICLIN DOMAIN PROTEIN 1 262 - -
Gso12g0569 265 Gene3D FAS1 domain 30 198 IPR036378 -
Gso12g0569 265 ProSiteProfiles FAS1/BIgH3 domain profile. 52 196 IPR000782 -
Gso12g0569 265 SMART fasc_3 94 199 IPR000782 -
Gso12g0569 265 SUPERFAMILY FAS1 domain 51 199 IPR036378 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso12g0569 Gso-Chr12 5119608 5120787 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso12g0569 - - gmx:100791112 412.92
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g0569 12 5119608 5120787 Gso11g1529 11 17785227 17786380 GST