Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso12g0566 ATGATGAAAAAGCAATCTCTCTTGTCCTCCTCACTAGCATTGCTAGTTTCATTTTTGTATTTCACCACCACTTTAGCCCAATTATCACCAGCTTCTGCCCCTTTCAAACCACCCCAACCTACCCCTATAGCACCAGCTGCAGCCCCAAAACCATTGGTTCCCTCATTGCCACAGTCACCAAGTGATTCCACCCCTGACAGTACTCCAGCTGTTGACATTGTTGGAATCCTGAGGAAGGCAAAGTCATTCAACATCCTAATCCGCCTCATGAAAACCACCCAATTGATCAACCAACTCAATGCTCAGCTTCTCACAACTAAATCAGGCGGCATAACCATTCTTGCACCTGATGACAGTGCCTTCTCAGAACTCAAAGCAGGCTTCCTCAACTCTCTTTCTGATGGACAAAAGCTTGAACTTCTTCAATTCCATGTTCTTTCGGACTATGTGTCTAGTTCCAACTTTGATACACTGACAAACCCAGTGAGAACACTAGCAGGGGCTAAGCCTGGAAAGGTGGAACTGAATGTGATAAGTTACGGAGGGAGTGTGAACATCTCAACGGGTGAGGTTAACACCACCATCACTGGCATTATATATACTGATAAGCATCTTGCTATATATAAGGTGGGTAAGGTGCTTCTTCCTATGGACTTCTTTGCTGTGGCCAAGGCACCTGCAAAGGCACCCTCTTTGGCACCAGAACCTTCAGCAAAGGCTCCTAAAGCTGATAAGGATCCATTATCCCCAGATTCCTCAGAATCATCTCAGATTAATTCTACAAATGAGAACTCTGGCACTGTGAAAATCAATGTGCATGGAAAGTGGGTGTCCCTTGTTCTTGGACTAGTTCTCATGACTGTATTCTCATCATAA 876 0.4486 MMKKQSLLSSSLALLVSFLYFTTTLAQLSPASAPFKPPQPTPIAPAAAPKPLVPSLPQSPSDSTPDSTPAVDIVGILRKAKSFNILIRLMKTTQLINQLNAQLLTTKSGGITILAPDDSAFSELKAGFLNSLSDGQKLELLQFHVLSDYVSSSNFDTLTNPVRTLAGAKPGKVELNVISYGGSVNISTGEVNTTITGIIYTDKHLAIYKVGKVLLPMDFFAVAKAPAKAPSLAPEPSAKAPKADKDPLSPDSSESSQINSTNENSGTVKINVHGKWVSLVLGLVLMTVFSS* 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso12g0566 291 SUPERFAMILY FAS1 domain 67 217 IPR036378 -
Gso12g0566 291 MobiDBLite consensus disorder prediction 230 264 - -
Gso12g0566 291 Gene3D FAS1 domain 55 216 IPR036378 -
Gso12g0566 291 MobiDBLite consensus disorder prediction 250 264 - -
Gso12g0566 291 MobiDBLite consensus disorder prediction 33 58 - -
Gso12g0566 291 ProSiteProfiles FAS1/BIgH3 domain profile. 70 214 IPR000782 -
Gso12g0566 291 Pfam Fasciclin domain 82 216 IPR000782 -
Gso12g0566 291 SMART fasc_3 112 217 IPR000782 -
Gso12g0566 291 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 1 290 IPR045003 -
Gso12g0566 291 MobiDBLite consensus disorder prediction 32 68 - -
Gso12g0566 291 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 1 290 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso12g0566 Gso-Chr12 5086749 5087879 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso12g0566 - - gmx:100790242 449.129
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g0566 12 5086749 5087879 Gso11g1525 11 17741947 17743126 GST