Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso12g0516 ATGAAAGAAGGTAAATCCGTTAAACTCAACCATCAACAACCGCACCAGAACGGTCACCTCACGCCTTCAAAATTCGCCAAATTGTTTGATCCCGAAGCTTCCTGGGACAAGGATCAATTGGGAGACGTATTGCATTGGATTAGACAAGTGCTTGGCCTTGCGTGTGGATTCCTTTGGGGTTCCATACCTTTGGTTGGAGGCATATGGTTTATCCTCTTTTTAGCGTTATCCACTGGGATCATATATAGTTACTATGCAGTAATGTTAAAGGTTGATGAGGAAGAGTTTGGCGGTCATGGAGCCCTCCTTCAAGAGGGGCTATTTGCTTCTATAACTCTTTTCCTGCTTTCCTGGATTCTAGTTTACAGTTTAGCACACTTCTGA 384 0.4375 MKEGKSVKLNHQQPHQNGHLTPSKFAKLFDPEASWDKDQLGDVLHWIRQVLGLACGFLWGSIPLVGGIWFILFLALSTGIIYSYYAVMLKVDEEEFGGHGALLQEGLFASITLFLLSWILVYSLAHF* 128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso12g0516 127 Pfam EMC6 43 122 IPR029008 -
Gso12g0516 127 PANTHER BNAA04G16800D PROTEIN 1 127 - -
Gso12g0516 127 PANTHER PROTEIN C20ORF24 RAB5-INTERACTING PROTEIN 1 127 IPR010742 GO:0097250
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso12g0516 Gso-Chr12 4605717 4608637 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso12g0516 - - gmx:100526939 265.388
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g0516 12 4605717 4608637 Gso11g1178 11 10582827 10585895 GST