Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso12g0483 ATGAGCAGTGATAGGAATATTGGGGTTGCCTTGGACTTTTCCAAAGGAAGCAAAATCGCTCTCAAATGGGCTATTGACAATCTTCTCCGCAACGGTGACATACTCTACATCGTCCACATCAAGCCTTCCGGAGGAAGTGAATTCCGAAATCTTCTCTGGTCCACCACTGGTTCACCTCTGATTCCGTTGTCGGAGTTTCGTGAGAAGGAGGTGATGCATCACTATGAGGTGGATACTGATGCTGAGGTGTTGGACTTGCTTGACACCGCTTCTAGGGAGAAACAGGTGACTGTGGTGGCAAAGCTATACTGGGGGGATGCAAGAGAGAAAATTGTGGAAGCTGTTGGGGATTTAAAGCTTGACTCTTTGGTCATGGGTAGCAGAGGATTGGGCGCCATACAGAGGGTATTGCTGGGGAGTGTGACTAATTATGTCACCACAAATGCGAGTTGCCCTATAACGATTGTGAAAGACTCTGCCCCTTCTACTAACTGA 495 0.4788 MSSDRNIGVALDFSKGSKIALKWAIDNLLRNGDILYIVHIKPSGGSEFRNLLWSTTGSPLIPLSEFREKEVMHHYEVDTDAEVLDLLDTASREKQVTVVAKLYWGDAREKIVEAVGDLKLDSLVMGSRGLGAIQRVLLGSVTNYVTTNASCPITIVKDSAPSTN* 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso12g0483 164 Gene3D HUPs 2 164 IPR014729 -
Gso12g0483 164 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 5 158 - -
Gso12g0483 164 Pfam Universal stress protein family 5 157 IPR006016 -
Gso12g0483 164 CDD USP_Like 6 156 - -
Gso12g0483 164 PANTHER IMP2'P 1 162 - -
Gso12g0483 164 PRINTS Universal stress protein signature 4 22 IPR006015 -
Gso12g0483 164 PRINTS Universal stress protein signature 117 129 IPR006015 -
Gso12g0483 164 PRINTS Universal stress protein signature 135 157 IPR006015 -
Gso12g0483 164 PANTHER ADENINE NUCLEOTIDE ALPHA HYDROLASE SUPERFAMILY PROTEIN 1 162 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso12g0483 Gso-Chr12 4308341 4310404 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso12g0483 4 48 Receptor kinase-like Gene Family AT5G35380 42.308 5.62e-06 43.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso12g0483 - - gmx:100306505 324.709
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g0483 12 4308341 4310404 Gso11g1144 11 10305847 10307697 GST