Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso12g0432 ATGGCAACTTCGTTATTCCGCAGCATAAGGAGAGCTTTCTTTGCTCTCAGATTCTCGTACTCTACCTCGTTTTCGGTCTCTCCCAGGTCAGTTGTTGGGAGGACTCAGATGTGTGTTTGTTCTCCGTTGAGGCACTGTGTCCCGGTGGGAGAGCAAGGTTATTGGTGGGGTTTGAGAAATTTGAGCTATGGCAGGGTGAACCTTGTGATAACGGGAGGGAAGACCAAGTTTGAGACTCATGAGGAAGAGCCTCCGAAGAAGGACAAGTGGACGACAAAGAAGAGGTTGAAGATGCAGAGGAAGAGAGAGAAGGAGAAGAGGAGAGCGGCCAACAGGAAGGACCCCCGTCAACTCGGCATCAAAGGGAAGAAGAAGAAGCAGAGATTTGCCTGTGCAGAAGAGAGAATCAAGTACAAGATTGAAAAAGCCAGAATTAAGGAAGCATTGCTCATTGAAAGGCTCAAACGATATGAAGTTCCTAAAGCTCAGGGTCCTGTTGTAAAGCCTGATGACTTGACGGGGGAGGAACGATTTTATTTGAAGAAAATGGCTCAGAAGAGATCTAATTATCTACAAATTGGCAGAAGAGGATTATTTGGAGGGGTTGTTCTCAATATGCATATGCATTGGAAGAAACATGAGACTGTTAAGGTCTTTTGCAAGCCTTGTAAACCTGGTCAAGTACATGAGTATGCACAAGAACTTGCCAGATTGAGTGGTGGTATTCCACTTCAAATAATTGGAGATGACACTATAATATTTTATCGCGGAAAGAACTATGAACAGCCTGAGGTTATGTCACCAATTGATACCCTGTCCAAGAAAAAGGCACTTGAAAAATCCAAGTATGAGCAATCACTTGAGTCAGTGAGGCGCTTCATTGCTATCGCTGAGAAAGAATTAGAGCTATATTGTAGGCACGTTGCACTCTATGGTGATCCAAACAACCGAAATCCCTTATCAATGATGGACGGCCCAAGTGGAAACTCAAAGGAAAAAGGTAATCATGGAATTAGTGATGATTTTTCAGTCAGTCTTTCAGAGACTGAAGCAGACTCCACGGAAATGGAGCTATCAGAAATAGAAGATAGTCTTGAAGATGAAAACATGTCAATGAATGAATCAGATTCTGAAGAGGACAGCATGTTGGATTCCAATGGTAATCAAGAAAGAGAGGTATATTTTACTAAAATTCAAGATGAAAGTGTAAGCTCGACCACAGGTTCTTGTTCTTCATCAGTGTCTGAAGATAGCCACTATTATAATAAGCAATACTTATAA 1281 0.4231 MATSLFRSIRRAFFALRFSYSTSFSVSPRSVVGRTQMCVCSPLRHCVPVGEQGYWWGLRNLSYGRVNLVITGGKTKFETHEEEPPKKDKWTTKKRLKMQRKREKEKRRAANRKDPRQLGIKGKKKKQRFACAEERIKYKIEKARIKEALLIERLKRYEVPKAQGPVVKPDDLTGEERFYLKKMAQKRSNYLQIGRRGLFGGVVLNMHMHWKKHETVKVFCKPCKPGQVHEYAQELARLSGGIPLQIIGDDTIIFYRGKNYEQPEVMSPIDTLSKKKALEKSKYEQSLESVRRFIAIAEKELELYCRHVALYGDPNNRNPLSMMDGPSGNSKEKGNHGISDDFSVSLSETEADSTEMELSEIEDSLEDENMSMNESDSEEDSMLDSNGNQEREVYFTKIQDESVSSTTGSCSSSVSEDSHYYNKQYL* 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso12g0432 426 Coils Coil 93 113 - -
Gso12g0432 426 MobiDBLite consensus disorder prediction 387 426 - -
Gso12g0432 426 PANTHER GROUP II INTRON SPLICING FACTOR CRS1-LIKE 1 386 IPR040286 -
Gso12g0432 426 MobiDBLite consensus disorder prediction 315 426 - -
Gso12g0432 426 SMART CRS1_YhbY_2 172 256 IPR001890 GO:0003723
Gso12g0432 426 MobiDBLite consensus disorder prediction 353 383 - -
Gso12g0432 426 MobiDBLite consensus disorder prediction 91 107 - -
Gso12g0432 426 SUPERFAMILY YhbY-like 172 266 IPR035920 -
Gso12g0432 426 ProSiteProfiles CRM domain profile. 170 267 IPR001890 GO:0003723
Gso12g0432 426 Pfam CRS1 / YhbY (CRM) domain 172 256 IPR001890 GO:0003723
Gso12g0432 426 MobiDBLite consensus disorder prediction 77 125 - -
Gso12g0432 426 PANTHER GROUP II INTRON SPLICING FACTOR CRS1-LIKE 1 386 - -
Gso12g0432 426 Gene3D - 172 270 IPR035920 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso12g0432 Gso-Chr12 3761241 3767950 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso12g0432 - - gmx:100796393 775.393