Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso12g0419 ATGCCTCGTTACAAGGACGAATCCCCTGCAGTTCGGGTCTACACTGTTTGTGATGAATCCAGATATTTGATTGTGAGGAACGTTCCAGAACTAGGTTGTGGGGATGAGTTGCTGAAATTGTTTTCTTCCTATGGAGAAGTCGAGGAGTGTAAGCCAATGGATGCAGAGGACTGTGAGAAATACACTGATGTATTTTGGATCAAATTCCGCCTTGTCAACAATGCCAGGTTTGCAAAAAGAAAATTGGACGATTTTGTTTTCTTTGGGAATAAACTGCAGGTTTCTTATGCTCCCCAATTTGAGAGCCTGTCTGACACAATGGATAAGTTAGAGGGAAGAAGAAGGGAGGTTTTAGCACGATTGAACCCTAGAAGATCTAAAGAGACCACAGCCTCAAGCTCTAAGCCCCGGATTACATCAAAGACCAATTGCTCACAACATTTAGATTCTAATGCAAGGGATGTAGAGCTCAAAGGAGGTTCACACAGTGGTAATTTTCCAATAAGAATGGTTTCCTCTAATGAGGATTATTTTGCTTCAAATTCCATGAATCAAACAGTGAGTCTTGTGCGGGATAAGCTTGATAAGATTCAATCAAGTGGTGAGAATACAAAAGCTGGATCTGCATCAAAGAAACAACGAGTTGATAATAGGAAGAGAATTTAA 666 0.4069 MPRYKDESPAVRVYTVCDESRYLIVRNVPELGCGDELLKLFSSYGEVEECKPMDAEDCEKYTDVFWIKFRLVNNARFAKRKLDDFVFFGNKLQVSYAPQFESLSDTMDKLEGRRREVLARLNPRRSKETTASSSKPRITSKTNCSQHLDSNARDVELKGGSHSGNFPIRMVSSNEDYFASNSMNQTVSLVRDKLDKIQSSGENTKAGSASKKQRVDNRKRI* 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso12g0419 221 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 21 99 IPR000504 GO:0003723
Gso12g0419 221 PANTHER UNCHARACTERIZED 3 221 IPR039599 -
Gso12g0419 221 MobiDBLite consensus disorder prediction 125 150 - -
Gso12g0419 221 Gene3D - 16 113 IPR012677 -
Gso12g0419 221 MobiDBLite consensus disorder prediction 121 150 - -
Gso12g0419 221 CDD RRM_RBM48 11 110 IPR034264 -
Gso12g0419 221 SUPERFAMILY RNA-binding domain, RBD 8 102 IPR035979 GO:0003676
Gso12g0419 221 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 23 92 IPR000504 GO:0003723
Gso12g0419 221 MobiDBLite consensus disorder prediction 197 221 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso12g0419 Gso-Chr12 3659980 3662536 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso12g0419 K24824 - gmx:100527829 444.506