Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso12g0413 ATGGCTGTCAACGACGCCGATCAATCCAATAAGGCTCATAGAACTCGTCAATCTGGTGCCAAAACCAACAAGAAGAAGACTAAGAAGAAGCAGAAGCTGAATCCCGATGACGTCGGAGGTGAGGATCCGAAGAAGCAAAACCCTAAGGCATTCGCCTTTTCTTCCTCCAACAAAGCCAAGCGCTTGCAATCACGCGCCGTCGAGAAAGAGCAGCGCCGCCTCCACGTTCCCGTCATCGACCGCTCCTACGGCGAGCCTGCTCCCTACGTCGTCGTCGTGCAGGGCCCTCCTCAGGTTGGGAAGTCACTGTTGATAAAGTCTTTGGTTAAGCATTACACGAAGCATAATTTGCCTGATGTGAGAGGTCCAATTACCATCGTATCAGGGAAGCAAAGGCGGGTGCAGTTTGTGGAATGTCCGAATGATATCAATGGCATGATAGATGCCGCGAAGTTTGCCGATCTAGCACTTCTTCTTATCGATGGAAGTTATGGTTTCGAAATGGAAACCTTTGAGTTCCTTAACATATTGCAAGTTCATGGGTTCCCGAAGGTCATGGGGGTTCTCACCCATCTTGATAAATTCAAGGATGCGAAAAAGTTGAGGAAAACAAAACAGCGACTCAAACACCGGTTTTGGACTGAAATATATGATGGTGCTAAACTATTTTACTTATCGGGCCTTATTCATGGAAAGTATGTCAAGCGTGAAGTTCACAATCTTGCTCGATTTATTTCAGTCATGAAGTTTCATCCTTTATCTTGGCGAACTTCCCACTCTTATGTTATGGTAGATCGTTTTGAAGACATCACTCCTCCTGAAAAAGTGCACGCAAATAATAAATGTGACAGAAAAGTCACTCTTTATGGTTATCTTAGAGGCTGTAATTTGAAAATGGGCAATAAGGTGCACATAGCAGGAGTGGGTGATTATAGTTTAGCTGGTATTACTGCTTTACCTGATCCTTGTCCTCTTCCATCTGCTGCAAAAAAGAAAGGACTGCGTGATAAGGAAAAATTATTTTATGCTCCCATGTCTGGGCTTGGGGATCTTCTATATGACAAAGATGCTGTATACATAAATATTAATGACCACCTTGTTCAATTCTCAAAAGTTGATGATGAAAACTCTGCTATGACGGGCAAAGGAAAAGGCAGCGATGTAGGGGAGGATTTGGTGAAATCACTACAGAATATCAAATACTCAATCAATGAAAAACTAGAGAACAGCTTTATCAATATTTTTGGTCAAAAGGCAAATGTGTCATCGGGAGCTCTAGGTGATGCACATGGCACAAACAAGAATGTTGAACAGAATGACAAAACAGAAGCTTTGGATAAATATCAGCCTGGGACTGGTGAAGATAATAACAAAACGGATTTGGATGTTTCAGAATCATCTGATCGGGATGAAGATGATGCCACTGACAGCGAAGCCTCTGGTTCTGATGAAGACGAAGATGCACCAAATAGTAATGCTAGGAATGGAGTCCACTTGCAAGAACATATTGATTTTCAAGATGGAAGATGGAGGAGAAGAGCAATATTTGGAAATGATGTTGATCAAAATGATCTGATGGATTCAGAAGGGGATGAGGATGGTGCTACCAGTAATGATGATGTAGAATCTTCAGAAGAAGAGGAGGAAGATGGCAATGATAATGATGACACAAATGAAGATGACACGGGTAACGTTTCCAAGTGGAAAGAGTCTTTGGCAGAAAGAACTCTCTCACGGAAAACTCCTAGTTTGATGCAACTTGTGTACGGGGAATCTACTATTAATTCCACCACTATAAACAGAGAGAATGATAATAGTGGAGATGAGGAAAGTGATGATGACTTTTTTAAGCCCATAGAAGAAGTGAAAAAGCTAAACATGAGAGATGGATTGAATGATGATGGGATGTTCAACACTGAGGATTGTGCGAAGTGTACACAATTTGTGGTTCAGAGATGGGATGAGAATGATAATGAGGAGATTCGCAACCGATTTGTGTCTGGCAATGTGGCAAAGGCTGCACTTAGAAATGCTTTACCGGCAGCTAATACTGAAGAGGACAATGATGACGTCTATGCTGACTTTGAAGATTTGGAAACAGGAGAAAAGCATGAGAATCATCGGACAGATGCTGCTTTTGCTGCAACAACTCACAAGGGAGATGATTTAGAAGCTGAGGAGCGGAGGCTCAAGAAACTTGCTCTTCGTGCTAAATTTGACTCTCAATTTGATGATGACTCTGGGTCACAAGAGGAAGATACGGGTAATGAAAATGAAGTCAAGTTCCATCGTGGTCAAGCTAATGAAAGTAGCTATTTTGACAAGTTGAAAGAGGAGATTGAACTCCAGAAACAAATGAATATAGCCGAACTCAATGATCTTGATGAGGCTACTCGATTGGAGATAGAAGGCTTCCAAACAGGAACATATCTAAGATTGGAGATTCGTGATGTTCCTTGTGAGATGGTTGAATACTTTGATCCCTACCATCCAATATTGGTTGGAGGGATTGGTATAGGGGAGGAAAATGTTGGATACATGCAGGCCAGGTTAAAGCGGCACAGGTGGCACAAGAAAGTTTTGAAGACTAGAGACCCAATTATTGTATCTGTTGGATGGAGGCGTTACCAAACGACCCCAATTTATGCCATTGAGGATAGTAATGGAAGGCATCGTATGCTAAAATATACTCCAGAGCACATGCATTGCCTTGCTATGTTTTGGGGCCCTCTTGCTCCTCCCAACACCGGGGTTGTAGCCATTCAGAATTTATCAAACAATCAGGCAACATTTAGGATTACTGCAACTGCAGTTGTACTTGAGTTTAATCATGCAGCAAGGATAGTGAAGAAAATCAAATTGGTTGGTTATCCATGCAAGATATTCAAGAAGACAGCACTTATCAAGGATATGTTTACTTCAGATCTTGAAGTAGCTCGGTTTGAAGGTGCAGCTATTCGGACAGTCAGTGGGATCAGGGGGCAGGTCAAGAAGGCTGCAAAAGAAGAGATAGGTAATCAAGCGAAAAGGAAGGGAGGGCAAACCAAAGAAGGAATTGCTAGGTGTACTTTTGAAGACAAAATTCTGATGAGTGACATTGTTTTCCTGCGTGCATGGACTCAAGTTGAAGTTCCTCAGTTTTATAATCCATTGACAACAGCATTGCAGCCTCGTGACATGACCTGGAAAGGAATGAGAACTGTCGCAGAATTGAGAAGAGAACACAATCTTCCTATTCCTGTAAATAAAGATTCACTTTACAAGAAAATTGAAAGAAAACCTAGAAAGTTCAATCCATTGGTGATTCCCAAGTCTCTACAAGCGAGTCTACCCTTTGCATCAAAACCGAAGGATATATCCAAGCGTAATAAGCCGTTACTTGAAGAGAGAAGGGGAAGGGGTGTTGTCATGGAACCTCGAGAGCGCAAAGTTCATGCTCTTGTTCAACACCTTCAGTTAATAAATAGTGAGAAGGTCAAAAAGAGAAAGCTTAAGGAAGAGAATAAGAGGAAAGCACTTGAGGCAGAGAGAACCAAAGAAGAGCAGTTGTTGAGAAAGCGCCAGAGAGAAGAGAGACGAGACAAATACCGGAAGGAAGACAAGCAGAATAAGAAGATTCGGAGAGCAGAGGTTTGA 3636 0.4216 MAVNDADQSNKAHRTRQSGAKTNKKKTKKKQKLNPDDVGGEDPKKQNPKAFAFSSSNKAKRLQSRAVEKEQRRLHVPVIDRSYGEPAPYVVVVQGPPQVGKSLLIKSLVKHYTKHNLPDVRGPITIVSGKQRRVQFVECPNDINGMIDAAKFADLALLLIDGSYGFEMETFEFLNILQVHGFPKVMGVLTHLDKFKDAKKLRKTKQRLKHRFWTEIYDGAKLFYLSGLIHGKYVKREVHNLARFISVMKFHPLSWRTSHSYVMVDRFEDITPPEKVHANNKCDRKVTLYGYLRGCNLKMGNKVHIAGVGDYSLAGITALPDPCPLPSAAKKKGLRDKEKLFYAPMSGLGDLLYDKDAVYININDHLVQFSKVDDENSAMTGKGKGSDVGEDLVKSLQNIKYSINEKLENSFINIFGQKANVSSGALGDAHGTNKNVEQNDKTEALDKYQPGTGEDNNKTDLDVSESSDRDEDDATDSEASGSDEDEDAPNSNARNGVHLQEHIDFQDGRWRRRAIFGNDVDQNDLMDSEGDEDGATSNDDVESSEEEEEDGNDNDDTNEDDTGNVSKWKESLAERTLSRKTPSLMQLVYGESTINSTTINRENDNSGDEESDDDFFKPIEEVKKLNMRDGLNDDGMFNTEDCAKCTQFVVQRWDENDNEEIRNRFVSGNVAKAALRNALPAANTEEDNDDVYADFEDLETGEKHENHRTDAAFAATTHKGDDLEAEERRLKKLALRAKFDSQFDDDSGSQEEDTGNENEVKFHRGQANESSYFDKLKEEIELQKQMNIAELNDLDEATRLEIEGFQTGTYLRLEIRDVPCEMVEYFDPYHPILVGGIGIGEENVGYMQARLKRHRWHKKVLKTRDPIIVSVGWRRYQTTPIYAIEDSNGRHRMLKYTPEHMHCLAMFWGPLAPPNTGVVAIQNLSNNQATFRITATAVVLEFNHAARIVKKIKLVGYPCKIFKKTALIKDMFTSDLEVARFEGAAIRTVSGIRGQVKKAAKEEIGNQAKRKGGQTKEGIARCTFEDKILMSDIVFLRAWTQVEVPQFYNPLTTALQPRDMTWKGMRTVAELRREHNLPIPVNKDSLYKKIERKPRKFNPLVIPKSLQASLPFASKPKDISKRNKPLLEERRGRGVVMEPRERKVHALVQHLQLINSEKVKKRKLKEENKRKALEAERTKEEQLLRKRQREERRDKYRKEDKQNKKIRRAEV* 1212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso12g0413 1211 MobiDBLite consensus disorder prediction 1161 1211 - -
Gso12g0413 1211 MobiDBLite consensus disorder prediction 560 574 - -
Gso12g0413 1211 SMART aarp2cn2 237 323 IPR012948 GO:0005634|GO:0042254
Gso12g0413 1211 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 87 224 IPR027417 -
Gso12g0413 1211 MobiDBLite consensus disorder prediction 466 485 - -
Gso12g0413 1211 MobiDBLite consensus disorder prediction 1 70 - -
Gso12g0413 1211 MobiDBLite consensus disorder prediction 524 559 - -
Gso12g0413 1211 PANTHER BNAC08G44910D PROTEIN 463 1203 - -
Gso12g0413 1211 PANTHER BNAC08G44910D PROTEIN 1 420 - -
Gso12g0413 1211 MobiDBLite consensus disorder prediction 521 574 - -
Gso12g0413 1211 MobiDBLite consensus disorder prediction 434 448 - -
Gso12g0413 1211 ProSiteProfiles Bms1-type guanine nucleotide-binding (G) domain profile. 87 251 IPR030387 -
Gso12g0413 1211 Coils Coil 1154 1199 - -
Gso12g0413 1211 MobiDBLite consensus disorder prediction 741 764 - -
Gso12g0413 1211 Gene3D - 89 251 IPR027417 -
Gso12g0413 1211 MobiDBLite consensus disorder prediction 429 500 - -
Gso12g0413 1211 CDD BMS1 50 279 IPR037875 GO:0005525
Gso12g0413 1211 SMART DUF663_2 714 1042 IPR007034 -
Gso12g0413 1211 Pfam AARP2CN (NUC121) domain 237 322 IPR012948 GO:0005634|GO:0042254
Gso12g0413 1211 Pfam 40S ribosome biogenesis protein Tsr1 and BMS1 C-terminal 722 1043 IPR007034 -
Gso12g0413 1211 PANTHER RIBOSOME BIOGENESIS PROTEIN 463 1203 IPR039761 GO:0042254
Gso12g0413 1211 PANTHER RIBOSOME BIOGENESIS PROTEIN 1 420 IPR039761 GO:0042254
Gso12g0413 1211 MobiDBLite consensus disorder prediction 30 44 - -
Gso12g0413 1211 MobiDBLite consensus disorder prediction 595 614 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso12g0413 Gso-Chr12 3605596 3614290 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso12g0413 K14569 - gmx:100792176 2244.16
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g0413 12 3605596 3614290 Gso11g1066 11 9518301 9526983 GST