Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso12g0400 ATGATTTACATGGCTTCTCTTCTGAAAAATCTACGTCCTGGTGTGCCTTCAGTTCATGATGATGGAAGTCATCATTACAGCTATGAGTACTCTTTTGCTGAGGAATACAAAGGTCCTCCTCTCAACTATTCCATCCCAGAAATTCTTCCCTTCAACGTTAACCAAATCCCTCTTGCACACGTTGCTGATCATTCTCCCCCTCATCACTTATCACTCCCAGTCATCCAACCCTTTACAAAAATCAATGCAGAATTGGATTCAAGAACTGATTCTATTTCTTCTGAGCCACTTTCATGCAGAGAAGAAGAGGATCATCATGATGATCATGATGGCCCTCTTAGTCCTAAACATGTTAAACGGCCTTCTGTGGTTACTTTTCGTGATCCCACGACAAATGAGATAGTGGAGGATGAAGAGTTAGTTGAATCTGTTAGAGGAAAAAGTAATAGTAGTAGTAGCAGCAGCAGCAGCCGTGTGAGGCCACATGCTGTGAGAGGTGGGAAGAAAGGATCGTGCTATCGATGCCTTAAAGGGAATCGTTTTACTGAGAGGGAGGTTTGCATTGTTTGCAGTGCGAAATATTGTGGCAACTGTGTGATTAGAGCAATGGGGTCAATGCCTGAAGGCAGAAAATGTGTCACTTGCATTGGTTATAGAATTGATGAGAGCAAGCGAGGGAAGCTTGGGAAACCTTCTAGGATGCTCAAGAAATTGTTGTCTGAGTGGGGAATGAAACAAATCATGAAGGATGAGATGTTTTGTAAAGCAAATCAGATACCAGCAGAAAATGTTATGGTGAATGGAGAACCTCTTGATTGGGATAAGCTCACTTTGCTTTTGACCTGTTCAAACCCACCAAAAGGATTGAAACCCGGTTTCTATTGGTATGATAAAGCATCTGGATTTTGGGGGAAGGAAGGTCAACGGCCAAGTCAAATTATTAGCCCACAGTTGGAGGTTGGGGGTCACTTGGAGAGAAATGCAAGCAATGGAAAGACAAATGTAACTGTAAATGGTCGAGAGATTACGAAAGAAGAGCTCTGGTTACTGAAGTGGGCAGGAGTGCCGTGTGAGGGAACAACTGAATTTTGGGTGAGTCATGATGGATCATACATGGAAGTGGGACAGAAGAATGTCAAGGGGAATATATGGAAGAAGTCTACAGTGAAGCTAGCTTCTCTAGTGCTCTCACTGCCAGTTCCTTCTAGCACTTTGAATCTTACCGCAGAAGAAGAAAATGGAATTAGCGAACACAACCTTCAACAGAAAACGCTTCACAAATTTTTACTTGTTGGTTCTGTCAAGTCTGGAACATGTACTATATTTAAACAGGCCAAGCTTTTGTATAATGTTCCTTTCTCTGAAAATGAGCGCCAAAACATCAAGTTGGTAATTCAAAGCAACTTGTATAGGTACCTTGGGATAATACTGGAGGCACGCGAAATTTTTGAAGAGAGTTTGCGCCAGAAAACTAACGGACGGCATTTTGATGAATCAACTTCTTCTGGGATCACTGGGGAAATTGTTGACACAACCTATTCCATTGGCCCAAGACTGAAAGCCTTCTCCAATTGGCTACTCAAATACATGGTGTCAGGTAACTTGGATGCAATATTTCCAGCAGCTGCGCGTGAATATGCCCCACTGGTGGAGGAACTGTGGAGGGATGCAGCCATTCAGGCCACATACAACAGAATAAATGAAATAAAAAATTTACCAAGAAGCGCGAGTTATTTTCTAGAAAGGGCTATTGAAATTTCCAGGATAGATTATGAACCCTTGGACACGGACATCTTGTATGCTGAAGGGATAACCTTATCCAATGGCCTTTCTTCTATGGAATTTTCATATACTGTGACAGGTCATGAGGACTCATTGGACCCTGAGTATCAACATGATCCTTCACTCAGGTACCAGCTCACCAGAGTAAATCCAAAAAGCCTAGGAGAAAACTGCAAGTGGTTGGACATGTTTGAAGACACTGATGTAGCCTTATTTTCGGTGGCCTTAACTGACTATGATGAGTACATAGTAGACAGTAATGGAGTTGCTATCAACAAAATTTTAGCAGCCAAACATCTCTTTGAAAGCATCATCACTCATAGAGTTTTCAGCAACAAGAAATTCCTTTTATTGTTGACTAAGTTTGATCTGCTTGAGGAAAAGATTGAACAGGTTCCTCTAACACAATGTGAATGGTTTTGTGACTTCGACCCAGTTATTAGCCACAATCATAAAACAGATAGTATTAGAAAACATAGCAATCATCCTCCATTGGCTCAACGTGCTTTTCAGTACATTGGTACGAAGTTCAAGCGATTGTTCAATTCTCATACTGGTCGAAAGCTGTTTGTTTCACTGGTTACTGGGTTGGAACCAGGTACTGTTGATGAAGCTCTTAGATATGCCAGAGAGGTTCTTGTGTGGGAAAAATGGGACCCCACTTTGAGAAATGAGAAGTCTGAGATAACATCCACAACTTTTGAGGCAAGCTCTGATGAAAAATATAATAACTATCACCCTTCATAG 2529 0.416 MIYMASLLKNLRPGVPSVHDDGSHHYSYEYSFAEEYKGPPLNYSIPEILPFNVNQIPLAHVADHSPPHHLSLPVIQPFTKINAELDSRTDSISSEPLSCREEEDHHDDHDGPLSPKHVKRPSVVTFRDPTTNEIVEDEELVESVRGKSNSSSSSSSSRVRPHAVRGGKKGSCYRCLKGNRFTEREVCIVCSAKYCGNCVIRAMGSMPEGRKCVTCIGYRIDESKRGKLGKPSRMLKKLLSEWGMKQIMKDEMFCKANQIPAENVMVNGEPLDWDKLTLLLTCSNPPKGLKPGFYWYDKASGFWGKEGQRPSQIISPQLEVGGHLERNASNGKTNVTVNGREITKEELWLLKWAGVPCEGTTEFWVSHDGSYMEVGQKNVKGNIWKKSTVKLASLVLSLPVPSSTLNLTAEEENGISEHNLQQKTLHKFLLVGSVKSGTCTIFKQAKLLYNVPFSENERQNIKLVIQSNLYRYLGIILEAREIFEESLRQKTNGRHFDESTSSGITGEIVDTTYSIGPRLKAFSNWLLKYMVSGNLDAIFPAAAREYAPLVEELWRDAAIQATYNRINEIKNLPRSASYFLERAIEISRIDYEPLDTDILYAEGITLSNGLSSMEFSYTVTGHEDSLDPEYQHDPSLRYQLTRVNPKSLGENCKWLDMFEDTDVALFSVALTDYDEYIVDSNGVAINKILAAKHLFESIITHRVFSNKKFLLLLTKFDLLEEKIEQVPLTQCEWFCDFDPVISHNHKTDSIRKHSNHPPLAQRAFQYIGTKFKRLFNSHTGRKLFVSLVTGLEPGTVDEALRYAREVLVWEKWDPTLRNEKSEITSTTFEASSDEKYNNYHPS* 843
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso12g0400 842 ProSiteProfiles G-alpha domain profile. 424 822 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Gso12g0400 842 SMART galpha_1 399 791 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Gso12g0400 842 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 423 811 IPR027417 -
Gso12g0400 842 PANTHER GTP-BINDING PROTEIN ALPHA SUBUNIT 17 86 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Gso12g0400 842 PANTHER GTP-BINDING PROTEIN ALPHA SUBUNIT 108 832 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Gso12g0400 842 SUPERFAMILY FYVE/PHD zinc finger 156 219 IPR011011 -
Gso12g0400 842 PANTHER EXTRA-LARGE GUANINE NUCLEOTIDE-BINDING PROTEIN 2 108 832 - -
Gso12g0400 842 PANTHER EXTRA-LARGE GUANINE NUCLEOTIDE-BINDING PROTEIN 2 17 86 - -
Gso12g0400 842 MobiDBLite consensus disorder prediction 145 160 - -
Gso12g0400 842 MobiDBLite consensus disorder prediction 95 116 - -
Gso12g0400 842 Pfam G-protein alpha subunit 412 805 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Gso12g0400 842 Gene3D - 600 814 IPR027417 -
Gso12g0400 842 Gene3D - 454 599 IPR011025 GO:0007165
Gso12g0400 842 SUPERFAMILY Transducin (alpha subunit), insertion domain 453 601 IPR011025 GO:0007165
Gso12g0400 842 MobiDBLite consensus disorder prediction 89 169 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso12g0400 Gso-Chr12 3513965 3519301 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso12g0400 - - gmx:100791124 1669.06