Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso12g0395 ATGCCGGAGGTGTACACCGTGAAGGTGGAAGAGGCAAGGCCAGCAACTCATGAAAAGCCATCAGCAGGTCCTGTCTACAGATGCATTTATGCCAAGGATGCTTTGACTGTTTTACCTTCTCATTTTGAATCTCCATGGGAATTCTTCAGGGACACGACAACGAGGTGCCCCAGCAACCCAATGCTGGGTCGGCGTCAAAAATCCGATTCCAAGGTGGGTCCCTATGAATGGATCACATATCAGGAGGCTTATGATGCTGCCATCCGAATGGGTTCCGCCATGAGGAGCCGTGATGTCAATCCTGGAGACCGTTGTGGCATATATGGGTCCAACTGCCCCGAATGGATAATTGCAATGGAGGCTTGCAATAGTTATGCAGTAACATATGTCCCATTATATGACACCCTGGGTCCTAATGCTGTGGAGTTTATCATAAACCATGCTGAAGTTTCGATTGCATTTGTACAGGATAACAAGTTTCCTTCTGTTTTGTCATGCCTTGATCGGTGTTCCAGTCTTAAAACTGTTGTGAGTTTTGGTAATGTTTCAACCACACAAAAGAAGGAAGCTGAGGAGCTTGGTGCATCTTGCTTCTCGTGGGAAGAGTTTCTCCAGTTGGGAAATATGGATTTAGACCTTCCACTGAAAAAGAAGACTAACATCTGCACAATCATGTACACAAGTGGAACAACAGGCGAGCCCAAAGGGGTCATTATTAAGAATGAGGCTTTCATGACTCAAGTGTTGTCTATTGACCAAATACTTAATTTAACTGACAGAGTGGGAACAGAAGACGACGTGTACTTTTCTTTCCTTCCTCTTGCTCATGTATATGACCAGATAATGGAGACCTATTGCATTTACAAGGGCTCCTCAATTGGATTTTGGCAAGGCGATGTCAGATTCTTGATGGAAGATATTCAAGCACTGAAACCAACTCTATTTTGTGCCGTTCCTAGAGTTTATGATCGTGTTTATGCTGGTATCAGTAGCAAAATTTCATCTGGAGGAGCACTGCAAAGTACATTGTTTCAATATGCATATAACTACAAGTTGGGATATCTGGAGAAGGGTCTTCCCCAAGACAAAGCAGCACCTTTGTTTGATAAGCTTGTGTTTGATAAGATAAAACAAGCATTAGGTGGACGGGTTCGTCTCCTGTTATCAGGAGCTGCTCCTTTGCCTAGGCATGTGGAGGAGTTTTTGAGGGTCACTTTTGGAGCTACTATGTCACAAGGATATGGTCTTACCGAAAGTTGTGGTGGGTGTTTCACTGCAATAAGCAATGTGTTTTCTATGATGGGAACGATTGGAGTTCCTATGACAACCATTGAGTCCAGGCTTGAATCTGTGCCAGAGATGGGGTATGATGCACTCTCCAGTGAAGCCCGGGGAGAAATTTGCCTTAGAGGGAATACCTTGTTCTCTGGTTACCACAAGCATCAAGATCTTACTGAAGAGGTTATGGTTGATGGTTGGTTTCATACAGGTGACATTGGAGAATGGCAGCCAAATGGAGCCATGAAAATTATTGATAGAAAAAAGAATATCTTTAAGTTGTCTCAAGGAGAATATGTTGCTGTGGAGAATATTGAAAACAAATACTTACAGTGCCCCCTTATAACATCGATTTGGGTCTATGGAAACAGTTTTGAATCTTTCTTGGTGGCAGTGGTGGTCCCTGAAAGAAAGGCCCTTGAGGATTGGGCAGTGAAGCATAATTCTACAGATGATTTCAAATCTTTATGTGAAAATCCAAAGGCAAGAAAATACATTTTGGATGAGCTCAACAACACTGGTCAGAAACACCAACTTAGAGGTTTTGAGCTGCTAAAAGCAGTTCATTTGGAACCAATTCCCTTTGACATGGAGAGAGATCTGATAACACCAACATTCAAGTTGAAGAGACCTCAATTGCTCAAGCAGTATAAGGAGTGTATTGATCAACTATACAAGGAAGCGAAGGCATAG 1971 0.4287 MPEVYTVKVEEARPATHEKPSAGPVYRCIYAKDALTVLPSHFESPWEFFRDTTTRCPSNPMLGRRQKSDSKVGPYEWITYQEAYDAAIRMGSAMRSRDVNPGDRCGIYGSNCPEWIIAMEACNSYAVTYVPLYDTLGPNAVEFIINHAEVSIAFVQDNKFPSVLSCLDRCSSLKTVVSFGNVSTTQKKEAEELGASCFSWEEFLQLGNMDLDLPLKKKTNICTIMYTSGTTGEPKGVIIKNEAFMTQVLSIDQILNLTDRVGTEDDVYFSFLPLAHVYDQIMETYCIYKGSSIGFWQGDVRFLMEDIQALKPTLFCAVPRVYDRVYAGISSKISSGGALQSTLFQYAYNYKLGYLEKGLPQDKAAPLFDKLVFDKIKQALGGRVRLLLSGAAPLPRHVEEFLRVTFGATMSQGYGLTESCGGCFTAISNVFSMMGTIGVPMTTIESRLESVPEMGYDALSSEARGEICLRGNTLFSGYHKHQDLTEEVMVDGWFHTGDIGEWQPNGAMKIIDRKKNIFKLSQGEYVAVENIENKYLQCPLITSIWVYGNSFESFLVAVVVPERKALEDWAVKHNSTDDFKSLCENPKARKYILDELNNTGQKHQLRGFELLKAVHLEPIPFDMERDLITPTFKLKRPQLLKQYKECIDQLYKEAKA* 657
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso12g0395 656 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 2 654 - -
Gso12g0395 656 Pfam AMP-binding enzyme 73 521 IPR000873 -
Gso12g0395 656 PANTHER LONG-CHAIN FATTY ACYL COA LIGASE 2 654 - -
Gso12g0395 656 CDD LC-FACS_euk 73 652 IPR045311 GO:0004467|GO:0006631
Gso12g0395 656 Pfam AMP-binding enzyme C-terminal domain 531 600 IPR025110 -
Gso12g0395 656 Gene3D - 33 513 IPR042099 -
Gso12g0395 656 ProSitePatterns Putative AMP-binding domain signature. 224 235 IPR020845 -
Gso12g0395 656 SUPERFAMILY Acetyl-CoA synthetase-like 33 652 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso12g0395 Gso-Chr12 3469701 3479788 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso12g0395 5 656 Acyl Lipid Metabolism Gene Families AT4G23850 55.657 0.0 791
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso12g0395 K01897 - gmx:100790068 1332.01
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g0395 12 3469701 3479788 Gso11g1050 11 9355081 9362775 GST