Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso12g0391 ATGGCACATAGCCACAAACCATCCTCAATTTCTCATCAAATCAAAACTCATACATACACAAATAACACAAAAATGAAATACAGTGAGATATCCCATTTCAGCCACCCACAGCACAAGCTGAGATTTGAGTACTCAGAATTCCCCTTCAAATGTGATGGCTGCAAGGAAGTAGGCATAGGATCACGTTACAAGTGCTCCATCTGTGACTTCGACCTTCACATGCACTGTGCCATGATAACCTCCCCCACCTTGCTCCACCCTTTCTACACCAAATGCAACTTCCAGTTCATGTCAAAGCCTCCAGGTGACACGCCTCGTTACTGCAACGCGTGCGAGAAGGACGTAAGAGGCTTCTTGTACCACTGCAAAGCGTGCGGGTTTGACCTCCACCCATGTTGCGCCAAGCTACCGATGGTCCTTGATGATGGTGAAGTGAAGCTGTACTTGTACAGAAAAGTGAGTTCACCCTGTCACCGTTGTGGCAGAAAAGGGCGTAGCTGGAGTTATAGGTCAAAGTGCAAGAACTATAATCTGCATGTGGCGTGTGTGAGGGACATGTTGGTGGAGAATTGGCACGAGGTGTATGTTAAAGGAAGGAGTGTGAATAGCAACATTCCAAGTCTGAGGAACACACTTTACACTCCTCATAATAGTAGAAGGAGTAAAGGGAAGGTGAAGAAATGCTGTGAGATTGCTGGTTTGGCTGTGCAGGTTGTGATATCAGCTGTGTTGGGAGATCCAACGGCTCTCATTGCAGGCCTTGTGGGCTCGTTCATGTCACGGGCTTGA 789 0.474 MAHSHKPSSISHQIKTHTYTNNTKMKYSEISHFSHPQHKLRFEYSEFPFKCDGCKEVGIGSRYKCSICDFDLHMHCAMITSPTLLHPFYTKCNFQFMSKPPGDTPRYCNACEKDVRGFLYHCKACGFDLHPCCAKLPMVLDDGEVKLYLYRKVSSPCHRCGRKGRSWSYRSKCKNYNLHVACVRDMLVENWHEVYVKGRSVNSNIPSLRNTLYTPHNSRRSKGKVKKCCEIAGLAVQVVISAVLGDPTALIAGLVGSFMSRA* 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso12g0391 262 ProSiteProfiles Zinc finger phorbol-ester/DAG-type profile. 37 92 IPR002219 -
Gso12g0391 262 PANTHER CYSTEINE/HISTIDINE-RICH C1 DOMAIN FAMILY PROTEIN 17 261 - -
Gso12g0391 262 Pfam C1 domain 98 134 IPR004146 -
Gso12g0391 262 Pfam C1 domain 33 77 IPR004146 -
Gso12g0391 262 SUPERFAMILY Cysteine-rich domain 83 140 IPR046349 -
Gso12g0391 262 Gene3D - 41 91 IPR043145 -
Gso12g0391 262 PANTHER CYSTEINE/HISTIDINE-RICH C1 DOMAIN PROTEIN 17 261 - -
Gso12g0391 262 SUPERFAMILY Cysteine-rich domain 27 80 IPR046349 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso12g0391 Gso-Chr12 3448207 3449216 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso12g0391 - - gmx:100790779 567.385
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g0391 12 3448207 3449216 Gso11g1045 11 9332153 9333290 GST