Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso12g0385 ATGGAGGCTTTCTCCGTACAATCACTCACCGCCACCACCATTCCCTCCTCTCTGTCACGTAGAGGTGCCACTGACAAACCTTCTGCCACCTCCCATGTTAACCTTTCCCATTTCATGAGGTACCCTTGTACCACAAGATCAACAAAACAAAAAATTCTTTGCACCAGAGCTCAAGCTTCAGGTTCAACGAAATCTAGTACGGGTAGTGCAGAGGGGATTTCTGAGAAAACAGATTCCAAGGATGACAACTTAGTATTTGTTGCCGGTGCTACTGGTAGAGTTGGTTCACGGACAGTGAGGGAGCTTATAAAGCTTGGATTTAGAGTCAGAGCTGGAGTGCGGAGTGCTCAGAGGGCCGGTGCATTAGTTCAGAGTGTTGAACAATTGAAGCTTGATGGTGCAAGTGGAGGGGGACAAGCTGTAGAGAAGCTTGAAATTGTGGAATGTGATTTGGAGAAACCAGAAACAATTGGATCGGCGTTAGGGGATGCGTCAACAGTGATATGTAGCATTGGTGCCAGTGAGAAGGAAGTTTTTGACATCACTGGACCCTTTCGGATAGATTATCAGGCCACCAAAAATCTAATTGATGCTGCAACTGTTGCCAAAGTAAATCACTTCATATTGGTTACTTCACTGGGAACAAACAAAATTGGCTTTCCTGCAGCTATCCTTAATTTGTTTTGGGGAGTCCTAGTTTGGAAAAGGAAGGCAGAAGAAGCACTGCTGGCCAGTGGACTTCCATACACAATAGTGAGACCTGGAGGTATGGAACGGCCTACTGATGCTTTTAAGGAAACTCATAATATAACCCTATCAACGGAAGATACTTTATTTGGGGGTCTGGTGTCAAACCTTCAGATTGCTGAACTCTTGGCAGTCATGGCCAAAAATCGTGATCTTTCATATTGTAAAATAGTGGAGGCAATTGCAGAGACAACTGCTCCACTGACTCCCATGGAGGAACTTCTTGCAAAGATACCTTCTCAACGTCCTTACATTTCTTCACCCAAGAAACCAGATATTGCAGCTGTCAGTGTTCCAGATCCCCCTGCTAATGTTGTGACTGTGGAACCTAAAGTTGCCACTCAACAAGAAACTGCACAACCTAAACCAGTGGCAAAACAACCACTTTCTCCTTATATCGTTTATGATGATTTGAAGCCACCATCATCTCCTTCTCCATCTCAGCCTGGTGGTGGGAAACCAACAAAGATCAGTGAGACAGTGCCAAAACCAAGTGCTTCAGATACTCCAAGTAGTGTGCCAGGAGTAGATGGCATCTCTCAGACAACATCGTCATCTAAAGTGGAGAAGCCTCTTTCTCCTTATGTAGCATATCCTGACTTAAAGCCTCCCACATCACCATCTCCTAATGCACCAACTGTATCAGTTTCCACACCTGCTGCAGCTGGGGTGCCGGAGATAGACACAATATCAAGCAATGGACCGGCCCAACTTTCAGCAGCAGATGAACCAAAGGAAGAACATCTCCCTGAACCCAAGTCAAGACCACTTTCACCTTATACCATGTATGAAGACTTGAAGCCTCCTGCATCACCATCACCTTCCTTCAGAAATTCTTAG 1587 0.4537 MEAFSVQSLTATTIPSSLSRRGATDKPSATSHVNLSHFMRYPCTTRSTKQKILCTRAQASGSTKSSTGSAEGISEKTDSKDDNLVFVAGATGRVGSRTVRELIKLGFRVRAGVRSAQRAGALVQSVEQLKLDGASGGGQAVEKLEIVECDLEKPETIGSALGDASTVICSIGASEKEVFDITGPFRIDYQATKNLIDAATVAKVNHFILVTSLGTNKIGFPAAILNLFWGVLVWKRKAEEALLASGLPYTIVRPGGMERPTDAFKETHNITLSTEDTLFGGLVSNLQIAELLAVMAKNRDLSYCKIVEAIAETTAPLTPMEELLAKIPSQRPYISSPKKPDIAAVSVPDPPANVVTVEPKVATQQETAQPKPVAKQPLSPYIVYDDLKPPSSPSPSQPGGGKPTKISETVPKPSASDTPSSVPGVDGISQTTSSSKVEKPLSPYVAYPDLKPPTSPSPNAPTVSVSTPAAAGVPEIDTISSNGPAQLSAADEPKEEHLPEPKSRPLSPYTMYEDLKPPASPSPSFRNS* 529
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso12g0385 528 MobiDBLite consensus disorder prediction 56 73 - -
Gso12g0385 528 Gene3D - 81 330 - -
Gso12g0385 528 Pfam NAD(P)H-binding 89 298 IPR016040 -
Gso12g0385 528 PANTHER PROTEIN TIC 62, CHLOROPLASTIC 470 526 IPR044719 -
Gso12g0385 528 PANTHER PROTEIN TIC 62, CHLOROPLASTIC 1 469 IPR044719 -
Gso12g0385 528 CDD SDR_a5 85 298 - -
Gso12g0385 528 MobiDBLite consensus disorder prediction 56 76 - -
Gso12g0385 528 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 82 271 IPR036291 -
Gso12g0385 528 MobiDBLite consensus disorder prediction 383 528 - -
Gso12g0385 528 MobiDBLite consensus disorder prediction 398 439 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso12g0385 Gso-Chr12 3393498 3398978 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso12g0385 - - gmx:100779056 1015.76
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g0385 12 3393498 3398978 Gso11g1036 11 9262628 9267997 GST