Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso12g0382 ATGGCTGTTCTTACACCCGTAAGTTCTTGCTTTGGAGCAAAGTATCAGGCTCTAGCACCATTGAGAATTTTAAGGGGTCTGGTGTGTCTACTGGTGCTGCTTTCAACAGCATTTATGATGTTAGTATTCTTTGGTTTTATAAGTGCTGTTGTAGTGCGAGTTTTTAGCGTCAGTTACAGCAGGAGAGCAACTTCCTTTATCTTTGGTGCTTGGTTAGCCTTGTGGCCTTTTCTATTTGAAAAGATCAACAAGACTAAAGTTGTGTTTTCTGGAGATATTGTTCCTTCAAGAGAACGAATCTTATTGATCGCAAATCATAGAACTGAGGTTGACTGGATGTATCTATGGGACCTTGCCTTGCGGAAGGGATGCCTTGGATACATAAAATATATACTTAAGAGCAGCTTGATGAGGCTTCCAGTTTTTGGTTGGGCATTTCACATACTAGAGTTCATCCCAGTGAAAAGAAAGTGGGAGGCTGATGAATCAATCATGCGCCATATGCTTTCTACATTCAAGGATCCACAAGATCCTCTCTGGCTTGCGCTTTTCCCAGAAGGCACTGATTTCACTGAGCAAAAGTGCCTTCGGAGTCAAAAATATGCTGCTGAACATAAGTTACCGGTTCTGAAAAATGTTTTACTTCCAAGGACAAAGGGCTTCTGTGCCTGCTTGCAAGAGTTGAGGAGCTCTCTCACTGCAGTTTATGATGTAACCATTGGCTACAAATACCGCTGCCCATCTTTCTTGGATAATGTCTTTGGGGTGGATCCTTCTGAAGTTCATATTCATATCCATCGCTTCCCCCTTGACAGTATCCCGGTATCTGAAGATGAAATTTCCATGTGGTTGATAAATAGATTCCAGACAAAGGATCAGTTACTTTCCAATTTTCAAACTCAAGGTCAGTTTCCAGATCAAGCATCAGAAAGGGACCTCTCTGCTGTTACGAGCATTTTAAATTGTATGACAATTGTTACAGTGACAGGTACAATGATGTACTACAGTTTTGCCTCTTTCTGGTTTAAACTTTATGTGTCTCTAGTCTGTGCGTATTTGGTTCCGGCCACATATTTCAATACTCGGCCGCAGCCCATTCTTAGCTTTTTGAAGATGAGAGCAAGGTAG 1128 0.4167 MAVLTPVSSCFGAKYQALAPLRILRGLVCLLVLLSTAFMMLVFFGFISAVVVRVFSVSYSRRATSFIFGAWLALWPFLFEKINKTKVVFSGDIVPSRERILLIANHRTEVDWMYLWDLALRKGCLGYIKYILKSSLMRLPVFGWAFHILEFIPVKRKWEADESIMRHMLSTFKDPQDPLWLALFPEGTDFTEQKCLRSQKYAAEHKLPVLKNVLLPRTKGFCACLQELRSSLTAVYDVTIGYKYRCPSFLDNVFGVDPSEVHIHIHRFPLDSIPVSEDEISMWLINRFQTKDQLLSNFQTQGQFPDQASERDLSAVTSILNCMTIVTVTGTMMYYSFASFWFKLYVSLVCAYLVPATYFNTRPQPILSFLKMRAR* 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso12g0382 375 CDD LPLAT_LCLAT1-like 76 266 - -
Gso12g0382 375 Pfam Acyltransferase C-terminus 254 320 IPR032098 -
Gso12g0382 375 Pfam Acyltransferase 91 243 IPR002123 GO:0016746
Gso12g0382 375 SMART plsc_2 100 222 IPR002123 GO:0016746
Gso12g0382 375 PANTHER 1-ACYL-SN-GLYCEROL-3-PHOSPHATE ACYLTRANSFERASE 5-RELATED 1 373 - -
Gso12g0382 375 SUPERFAMILY Glycerol-3-phosphate (1)-acyltransferase 34 214 - -
Gso12g0382 375 PANTHER 1-ACYLGLYCEROL-3-PHOSPHATE ACYLTRANSFERASE-RELATED 1 373 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso12g0382 Gso-Chr12 3354782 3358732 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso12g0382 14 365 Miscellaneous Gene Families AT1G75020 61.473 3.26e-162 457
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso12g0382 K13513 - gmx:100814885 739.954
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g0382 12 3354782 3358732 Gso11g1031 11 9219031 9223164 GST