Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso12g0379 ATGTCGAAGTTAATCTTCGTGTTCCTTGCACTAATTCCTCTTCTCTGCACCTCCTTCTCGCCAGAGAAACCCTCAGATCGGCGCATCCTCGTTTTGCTCGATGACTTCGCCATCAAATCCTCTCACTCTCTCTTCTTCAACTCCCTCAAATCTCGCGGCTTCGATCTCCAATTCCACCTCGCCGACGACCCCAAAATTGCGCTCCAGAGATACGGCCAGTACCTCTACGACGCCCTAATTCTCTTTTCCCCCACCATTGAACGTTTTGGAGGATCCATTGACGCGGCTGCAATTTTGGATTTTGTTGATTCGGGTCATGATTTGATCGTTGCTGCTGATAGCAATGCATCTGATTTAATCAGGGAAATAGCCACCGAGTGTGGAGTGGACTTTGATGAGGATCCTGCTGCTGTGGTTGTGGATCATTCGGCATATGCAGTCTCTGCTACTGAAGGAGATCATACATTGATTGCTAGTGATGATTTTATCAAGTCTGACGTCATATTTGGAAGCAAAAAAATTGAGGCTCCAGTACTTTTCCAGGGGATTGGGCATTCACTAAATCCTACCAATAGCCTGGTGTTGAAAGTTCTCTCTGCATCTCCTTCAGCCTTTTCTGCTAACCCAAAATCTAAAGTGACAAGTCCTCCATCACTCACTGGAACTTCAATCTCATTAGTTTCAATTATACAGGCAAGAAATAATGCCCGGATATTGATCTCTGGCTCATTGAGCTTGTTCAGCAACCGATTTTTCAGGTCAGGTGTGCAGAAGGCTGGGAGTCCAACCAAACATGAGAAGTCAGGTAATGAGCAGTTCTTGAATGAACTTAGCAAATGGATTTTCCATGAACGAGGTCACCTCAAGGCGGTGAATGTGCAACACCACAAAGTTGGGGAAGCTAATGAACCAGCCATCTATCGGATCAATGATAATTTGGAATACTCTGTTGAAGTTTATGAGTGGTCTGGGACAGCATGGGAACCTTACGTAGCTGATGATGTTCAAGTGCAATTTTACATGATGAGCCCCTATGTCTTGAAGACTTTATCAACTGATGGCAAGGGCCGTTATTTCACATCATTTAAGGTTCCAGATGTCTATGGGGTTTTCCAATTCAAAGTTGAGTACGAAAAACTTGGATATACAAGCTTATCTTTATCAAAGCAGATTCCTGTTCGTCCCTTTAGACACAATGAATATGAAAGATTTATACCAGCAGCCTATCCCTATTATGGAGCATCATTTTCAATGATGGTGGGTTTCTTCATCTTCACTGCAGTTCATCTATACAGCAAGTAG 1302 0.437 MSKLIFVFLALIPLLCTSFSPEKPSDRRILVLLDDFAIKSSHSLFFNSLKSRGFDLQFHLADDPKIALQRYGQYLYDALILFSPTIERFGGSIDAAAILDFVDSGHDLIVAADSNASDLIREIATECGVDFDEDPAAVVVDHSAYAVSATEGDHTLIASDDFIKSDVIFGSKKIEAPVLFQGIGHSLNPTNSLVLKVLSASPSAFSANPKSKVTSPPSLTGTSISLVSIIQARNNARILISGSLSLFSNRFFRSGVQKAGSPTKHEKSGNEQFLNELSKWIFHERGHLKAVNVQHHKVGEANEPAIYRINDNLEYSVEVYEWSGTAWEPYVADDVQVQFYMMSPYVLKTLSTDGKGRYFTSFKVPDVYGVFQFKVEYEKLGYTSLSLSKQIPVRPFRHNEYERFIPAAYPYYGASFSMMVGFFIFTAVHLYSK* 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso12g0379 433 Pfam Oligosaccharyltransferase 48 kDa subunit beta 28 433 IPR005013 GO:0005789|GO:0018279
Gso12g0379 433 PANTHER DOLICHYL-DIPHOSPHOOLIGOSACCHARIDE--PROTEIN GLYCOSYLTRANSFERASE 48 KDA SUBUNIT 4 433 - -
Gso12g0379 433 PANTHER DOLICHYL-DIPHOSPHOOLIGOSACCHARIDE--PROTEIN GLYCOSYLTRANSFERASE 48 KDA SUBUNIT 4 433 IPR005013 GO:0005789|GO:0018279
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso12g0379 Gso-Chr12 3332800 3336921 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso12g0379 K12670 - gmx:100806848 855.129
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g0379 12 3332800 3336921 Gso11g1028 11 9197096 9201400 GST