Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso12g0365 ATGGACGAGAAGCTCATACAGCGGTTAGAATCGGCGGTGTTGCGCTTGGAGTCGCTATCCTCTGGACTCCACCCCTCCGCTTCACAATCCGGCGGCGCCCACGCTCCCGATGCGGCGCTCGATCCCTCCGTCGTCGCCTTCGCCGATCTGATCGACCAGTACGTCGGTAGGGTTTCCGGCGCTGCAGAGGTTATCGGCGGACAGGTCTTGGGTGTCACCAAGCTGGTGCAGGAAGCTTTCAATGTTCAGAAAGAGCTTTTGATTAAGCTCAAACAGACTCAGAAGCCTAACCTCGCTGGGTTGTCTGAATTTCTGAAACCATTGAATGAAGTGATCACAAAAGCTACCAAATTGACAGAAGGAAGGAGATCTGATTTTTTTAATCACTTAAAGGCTGCTGCTGACAGTCTCTCAGCTCTAGCATGGATTGCATATACAGGGAAGGATTGTGGTATGAGCATGCCAATTGCGCATGTGGAAGAAAGTTGGCAAATGGCTGAGTTTTACAGCAACAAGGTGCTTGTGGAGTACAGAAACAAAGACCCAAATCATGTTGAGTGGGCCAAAGCTCTCAAAGAGTTGTATCTCCCTGGATTGAGAGATTATGTCAAGAGCTTTCATCCTTTAGGCCCTGTTTGGAGTCCAACAGGAAAAATAATTGCTCCATCAAAAGCTTCTGCTCCTGCTGCCCCTCCCCCTCCACCTGCTTCTCTCTTTAGTTCTGAATCATCTCAGGCTTCATCTTCTAAGCCTAAAGAGGGGATGTCTGCTGTTTTTCAACAAATCAGTTCAGGAAACGTCACTTCAGGTTTGAAAAAGGTTACGAATGATATGAAGACTAAGAATCGCACCGATAGAACTGGAGTTGTTGGGGCTATTGAAAAAGAAACTCCTGCAAGTTCACGTGTGTTTTCTAAAGCTGGACCTCCAAAATTTGAACTTCAAATGGGCCGCAAATGGGTTGTTGAGAATCAAATTGAGAAGAAAGACTTGGTCATTGAAGATTGTGATTCAAAGCAGTCTGTATATATTTATGGATGCAAAAACTCTGTTTTGCAAATTCTAGGCAAGGTCAACAATATAACAATTGACAAATGCACAAAGATTGGAGTTGTATTTAAGGATGTTGTTGCAGCATGTGAGATTGTAAACAGTAACGGGGTTGAGGTTCAATGCCAGGGTGCAGCTCCTACAATTTCAGTGGACAACACTTCTGGCTGCCAGCTATATCTGAGTAAAGACTCTTTAGAAGCATCCATAAGTACAGCAAAGTCAAGCGAGATCAATGTATTGGTTCCTGGTGCTGATCCTGATGGTGATTGGGTGGAGCATTCTTTGCCACAACAATACATTCATTTGTTCAAGAATGAGCACTTTGAAACAACTCCTGCTGCTCATTCTGGAGGTTAA 1410 0.4504 MDEKLIQRLESAVLRLESLSSGLHPSASQSGGAHAPDAALDPSVVAFADLIDQYVGRVSGAAEVIGGQVLGVTKLVQEAFNVQKELLIKLKQTQKPNLAGLSEFLKPLNEVITKATKLTEGRRSDFFNHLKAAADSLSALAWIAYTGKDCGMSMPIAHVEESWQMAEFYSNKVLVEYRNKDPNHVEWAKALKELYLPGLRDYVKSFHPLGPVWSPTGKIIAPSKASAPAAPPPPPASLFSSESSQASSSKPKEGMSAVFQQISSGNVTSGLKKVTNDMKTKNRTDRTGVVGAIEKETPASSRVFSKAGPPKFELQMGRKWVVENQIEKKDLVIEDCDSKQSVYIYGCKNSVLQILGKVNNITIDKCTKIGVVFKDVVAACEIVNSNGVEVQCQGAAPTISVDNTSGCQLYLSKDSLEASISTAKSSEINVLVPGADPDGDWVEHSLPQQYIHLFKNEHFETTPAAHSGG* 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso12g0365 469 ProSitePatterns CAP protein signature 1. 5 17 IPR018106 -
Gso12g0365 469 MobiDBLite consensus disorder prediction 223 255 - -
Gso12g0365 469 SUPERFAMILY C-terminal domain of adenylylcyclase associated protein 309 468 IPR036223 -
Gso12g0365 469 PANTHER ADENYLYL CYCLASE-ASSOCIATED PROTEIN 1 468 - -
Gso12g0365 469 Pfam Adenylate cyclase associated (CAP) N terminal 3 57 IPR013992 GO:0003779|GO:0007010
Gso12g0365 469 ProSiteProfiles C-CAP/cofactor C-like domain profile. 309 446 IPR017901 -
Gso12g0365 469 Gene3D - 43 218 IPR036222 -
Gso12g0365 469 SUPERFAMILY N-terminal domain of adenylylcyclase associated protein, CAP 43 235 IPR036222 -
Gso12g0365 469 MobiDBLite consensus disorder prediction 239 255 - -
Gso12g0365 469 SMART carp 385 422 IPR006599 -
Gso12g0365 469 SMART carp 347 384 IPR006599 -
Gso12g0365 469 Pfam Adenylate cyclase associated (CAP) C terminal 309 466 IPR013912 GO:0003779|GO:0007010
Gso12g0365 469 Gene3D - 308 468 IPR016098 -
Gso12g0365 469 PANTHER ADENYLYL CYCLASE-ASSOCIATED PROTEIN 1 468 IPR001837 GO:0003779|GO:0007010
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso12g0365 Gso-Chr12 3202682 3207800 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso12g0365 K17261 - gmx:100780824 876.315
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g0365 12 3202682 3207800 Gso11g1011 11 9016460 9021695 GST