Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso12g0343 ATGGCAGCCATAGAAACAAACACAAAGAGCTCCCTGCATATTCGCAGCAACAGCTTGCCCTCCGCACCTCACCCCTTTACATCACAATTTGAAGAGCACTTGCACAGATTAAAGGATTCTAAAGCCATCTCTTCTTCAACATCATCTTCAATAAACTACAAACTCAATGCCTTGCAAGATTTGCATGAGTGTGCTGATAAGCTTCTCCTATTGCCAATCACCCAGCAAGCCTTGGCACGAGAGTGTAGCAATGAATGTGTTGATGAACTACTAGATGGATCTGTGAGGATCTTGGATATCTGTAGTACAATTAAAGATTGCCTACTGCAACACAAGGAAAGAGTGCATGAACTTGAGTCAGCTATTCGCAGGAGAAGAGATGCCGAGGCCGGATTCACAGTTTCGAGTGGAAAATACTTGGCATCTAGGAAGCAGGTGAAAAAAGCAATTCGGAAGGCCTTAGGAAATTTGAAAGGATTCAAGAATGAACTCATATTTGCTTCCTCAAACAAAGACAACGAGACATTGTCCATGCTTAGCTTCTTAAAAGAATCAGAACTAGTCACCGTGAGCTCATTAAAAGCCTTCTTGTTGTTTATCACTGGCTCAAAGGGACAATCAAAACAGAACAGGTGGTCAATAATCTCCAAGTTGATGCAACCAAATAGAGTGGGATGTGACTCTCAAGAGGCAGATACAAATGAATTTGAAAAGGTGGATGCTGCTTTGATGTCTCTCATCAATCACAAGTCTTCATCTATTGATAATTTTCAAAGCCATATGGAAAATTTGGGGATGTGCATTGAGAATCTAGAAGTAGGATTTGAATGCCTCTCAAGGCAACTAATTAGAACCAGAGTTTCCCTTCTCAACATCTTCAACCACTAG 888 0.4122 MAAIETNTKSSLHIRSNSLPSAPHPFTSQFEEHLHRLKDSKAISSSTSSSINYKLNALQDLHECADKLLLLPITQQALARECSNECVDELLDGSVRILDICSTIKDCLLQHKERVHELESAIRRRRDAEAGFTVSSGKYLASRKQVKKAIRKALGNLKGFKNELIFASSNKDNETLSMLSFLKESELVTVSSLKAFLLFITGSKGQSKQNRWSIISKLMQPNRVGCDSQEADTNEFEKVDAALMSLINHKSSSIDNFQSHMENLGMCIENLEVGFECLSRQLIRTRVSLLNIFNH* 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso12g0343 295 PANTHER DUF241 DOMAIN PROTEIN 9 294 - -
Gso12g0343 295 Coils Coil 143 163 - -
Gso12g0343 295 MobiDBLite consensus disorder prediction 1 20 - -
Gso12g0343 295 Pfam Protein BPS1 54 292 IPR004320 GO:0048364|GO:0048367
Gso12g0343 295 PANTHER BPS1-LIKE PROTEIN 9 294 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso12g0343 Gso-Chr12 3055444 3056565 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso12g0343 - - gmx:102662897 511.916
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g0343 12 3055444 3056565 Gso11g0991 11 8857512 8860043 GST