Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso12g0307 ATGATCCGAGATGAATACTATCCTCTTCAGCTAATTAAGATGGCTGAATCTCTGAAAGATTACGAGGAGGATTTTGAAAATCCTGAAAAGAAGCCCAGAAGGAACAAGTACGCTTTCGCATGTGCTATTTTGGCTTCAATGACTTCCATCCTACTAGGTTACGATATTGGAGTGATGAGCGGAGCAGCACTGTACATACAAAGAGATCTCAAGGTATCGGACGTGCAAATCGAAATCCTGAACGGTATCATAAACCTCTACTCTCCCGTCGGTTCTTTCATCGCCGGCAGAACCTCCGACTGGATAGGTCGCCGTTACACCATCGTCCTCGCCGGCGCCATCTTCTTCGTCGGAGCCATCCTCATGGGATTCTCCCCCAACTATGCCTTTCTCATGTTTGGCCGCTTCTTCGCCGGCGTCGGCATCGGCTTCGCCTTCCTCATCGCCCCCGTCTACACCTCCGAAATCTCCCCCAGCTCCTCTCGCGGCTTCCTCACTTCCTTGCCTGAGGTATTTCTGAACGGAGGGATTTTAATAGGATACATTTCAAACTACGGATTTTCGAAGCTGGCACTGCGGTTGGGTTGGCGGCTGATGCTGGGAGTGGGAGCCATTCCTTCAATTTTGATTGGCGTGGCAGTGTTAGCCATGCCGGAGTCGCCAAGGTGGCTGGTGGCAAAAGGTCGATTAGGCGAAGCCAAAAGAGTTCTCTACAAAATCTCCGAGTCGGAGGAAGAGGCTCGGCTCAGACTAGCCGATATCAAAGACACGGCTGGGATCCCTCAAGACTGCGACGACGACGTCGTTTTGGTGTCGAAGCAAACCCACGGCCACGGCGTCTGGAGAGAGCTTTTCCTTCACCCCACTCCCGCGGTTCGCCACATCTTCATCGCGTCGCTTGGGATTCACTTCTTCGCGCAAGCCACGGGCATAGACGCCGTCGTTTTGTACAGCCCAAGAATCTTCGAGAAGGCCGGGATCAAATCCGATAACTACCGTCTCCTCGCCACGGTTGCGGTTGGGTTCGTCAAGACCGTTTCCATTTTGGTCGCCACTTTTTTCTTGGACCGGGCCGGGCGGCGCGTGTTGCTGCTTTGCAGCGTTAGTGGGCTCATACTCTCGCTTTTGACTCTGGGCCTGAGTCTCACTGTGGTGGACCATTCGCAGACCACGCTGAATTGGGCCGTTGGGCTCAGCATCGCTGCGGTGTTGTCCTACGTGGCAACTTTCTCTATCGGGTCTGGGCCCATCACGTGGGTTTATAGCTCCGAGATATTCCCGTTGAGGCTGCGGGCTCAGGGCGTGGCAATTGGGGCAGCGGTTAATAGGGTCACCAGTGGGGTCATTGCGATGACTTTTTTGTCCCTCCAGAACGCTATTACCATTGGGGGTGCTTTCTTTCTTTTCGCTGGTGTCGCTGCTGTTGCGTGGATTTTTCACTACACGCTGCTCCCTGAAACACGTGGGAAGACTCTCGAGGAAATTGAAAAGTCTTTCGGTAATTTCTGCAGGAAACCCAAAGCGGAAGAAGGACTTGACGATAACGTTGAAATCCAATTAAAGACCCGTGACCAAACTTTGACAAGCGTCGATTAG 1596 0.5282 MIRDEYYPLQLIKMAESLKDYEEDFENPEKKPRRNKYAFACAILASMTSILLGYDIGVMSGAALYIQRDLKVSDVQIEILNGIINLYSPVGSFIAGRTSDWIGRRYTIVLAGAIFFVGAILMGFSPNYAFLMFGRFFAGVGIGFAFLIAPVYTSEISPSSSRGFLTSLPEVFLNGGILIGYISNYGFSKLALRLGWRLMLGVGAIPSILIGVAVLAMPESPRWLVAKGRLGEAKRVLYKISESEEEARLRLADIKDTAGIPQDCDDDVVLVSKQTHGHGVWRELFLHPTPAVRHIFIASLGIHFFAQATGIDAVVLYSPRIFEKAGIKSDNYRLLATVAVGFVKTVSILVATFFLDRAGRRVLLLCSVSGLILSLLTLGLSLTVVDHSQTTLNWAVGLSIAAVLSYVATFSIGSGPITWVYSSEIFPLRLRAQGVAIGAAVNRVTSGVIAMTFLSLQNAITIGGAFFLFAGVAAVAWIFHYTLLPETRGKTLEEIEKSFGNFCRKPKAEEGLDDNVEIQLKTRDQTLTSVD* 532
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso12g0307 531 ProSitePatterns Sugar transport proteins signature 2. 137 162 IPR005829 GO:0016021|GO:0022857|GO:0055085
Gso12g0307 531 PANTHER POLYOL/MONOSACCHARIDE TRANSPORTER 1 20 522 - -
Gso12g0307 531 Gene3D MFS general substrate transporter like domains 31 501 IPR036259 -
Gso12g0307 531 Pfam Sugar (and other) transporter 41 499 IPR005828 GO:0016021|GO:0022857|GO:0055085
Gso12g0307 531 TIGRFAM SP: MFS transporter, sugar porter (SP) family 17 495 IPR003663 GO:0016020|GO:0022857|GO:0055085
Gso12g0307 531 ProSitePatterns Sugar transport proteins signature 1. 95 112 IPR005829 GO:0016021|GO:0022857|GO:0055085
Gso12g0307 531 PRINTS Sugar transporter signature 49 59 IPR003663 GO:0016020|GO:0022857|GO:0055085
Gso12g0307 531 PRINTS Sugar transporter signature 132 151 IPR003663 GO:0016020|GO:0022857|GO:0055085
Gso12g0307 531 PRINTS Sugar transporter signature 306 316 IPR003663 GO:0016020|GO:0022857|GO:0055085
Gso12g0307 531 PRINTS Sugar transporter signature 400 421 IPR003663 GO:0016020|GO:0022857|GO:0055085
Gso12g0307 531 PRINTS Sugar transporter signature 423 435 IPR003663 GO:0016020|GO:0022857|GO:0055085
Gso12g0307 531 ProSiteProfiles Major facilitator superfamily (MFS) profile. 41 488 IPR020846 GO:0022857
Gso12g0307 531 PANTHER SOLUTE CARRIER FAMILY 2, FACILITATED GLUCOSE TRANSPORTER 20 522 IPR045262 GO:0015144
Gso12g0307 531 SUPERFAMILY MFS general substrate transporter 24 497 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso12g0307 Gso-Chr12 2701729 2703965 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso12g0307 28 525 Organic Solute Cotransporters AT3G18830 66.139 0.0 694
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso12g0307 - - gmx:100816478 1007.67