Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso12g0306 ATGGAAATGTGTGGAGCCACAGCACTGACATGGTCCCATACCATCTGTCCGTCGCTTCACCTTCCTCGATCCGTCTCTACCAGGGAGGCTAGGAGCTTCTGTGTTTGGTGTGTCTCTGATCAAGACCCCAAGGGAAATAAAATGATCATATCTGTAACTGGAGCAACAGGTTTTATTGGTAGAAGGTTGGTGCAAAGATTGCATGCAGACAATCACAGTGTTCATGTCTTGACACGATCTAAATCTAAAGCAGAAACAATTTTTCCAGCAAAAGACTTTCCAGGAATCAAGATAGCAGAAGAGCCAGAATGGAAAGATAGCGTTCAGGGCTCAACAGGGGTTGTGAATTTGGCTGGACTGCCCATAAGTACCCGGTGGTCTCCTGAGATAAAGAAGGAAATCAAGCAAAGCAGGATTCGAGTGACCTCAAAGGTTGCAGAATTGATAAACAGTGCACCAGATGATATTCGACCTAAAGTTTTTGTTAGTGCAACAGCTGTTGGTTATTATGGCACCAGTGAGACACAAGTCTTTGATGAACAAAGTCCATCAGGAAAGGATTACTTGGCTGAGGTTTGCAGGGAATGGGAATCCACAGCCCTAAAGGTAAATGGAGATGTTAGAGTGGCTCTAATTCGCATTGGTGTTGTTCTTGGTAAAGATGGTGGAGCATTAGTTAAAATGATACCTATCTTCAACTTGTTTGCTGGTGGACCTCTAGGCTCTGGAAAACAATGGTTCTCCTGGATTCATTTGGAAGACATTGTCAATTTAATATATGAAGCACTATCAAATCCATCTTACAAAGGTGTTATCAATGGAACTGCACCAAATCCTGTGCGATTGGCAGAATTGTGTGACCAGCTGGGAAATGTCTTGGGTCGTCCCTCATGGCTGCCAGTACCGGACTTTGCGCTCAAGGCTGTCCTTGGAGAAGGTGCTACTGTGGTTTTAGAAGGGCAGAGAGTGCTTCCTATTCAAGCTAAGAAGTTGGGTTTCCCATTCAAATATCCTTACGTGAAGGATGCCCTTCAAGCAATTCTTTCTTGA 1050 0.4419 MEMCGATALTWSHTICPSLHLPRSVSTREARSFCVWCVSDQDPKGNKMIISVTGATGFIGRRLVQRLHADNHSVHVLTRSKSKAETIFPAKDFPGIKIAEEPEWKDSVQGSTGVVNLAGLPISTRWSPEIKKEIKQSRIRVTSKVAELINSAPDDIRPKVFVSATAVGYYGTSETQVFDEQSPSGKDYLAEVCREWESTALKVNGDVRVALIRIGVVLGKDGGALVKMIPIFNLFAGGPLGSGKQWFSWIHLEDIVNLIYEALSNPSYKGVINGTAPNPVRLAELCDQLGNVLGRPSWLPVPDFALKAVLGEGATVVLEGQRVLPIQAKKLGFPFKYPYVKDALQAILS* 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso12g0306 349 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 46 310 IPR036291 -
Gso12g0306 349 Pfam Domain of unknown function (DUF1731) 301 347 IPR013549 -
Gso12g0306 349 Gene3D - 44 338 - -
Gso12g0306 349 Pfam NAD dependent epimerase/dehydratase family 50 267 IPR001509 -
Gso12g0306 349 CDD SDR_a8 50 348 - -
Gso12g0306 349 PANTHER SUGAR NUCLEOTIDE EPIMERASE RELATED 47 348 - -
Gso12g0306 349 TIGRFAM yfcH: TIGR01777 family protein 50 344 IPR010099 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso12g0306 Gso-Chr12 2696019 2701566 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso12g0306 K07071 - gmx:100814881 704.901