Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso12g0298 ATGGCCATTAGAAAATCAAACAAACTTCCCCAACACGCAGTAGTTTTGAAGCAAATCCTAAAGAGGTGTTCGAGCCTAGGAAAGAAAAACGGGTACGATGATGATGGGCACCCAGTTGATGTCCCAAAGGGACACTTTGCTGTTTATGTTGGCGAAAACCGACGTAGGTACATTGTGCCAATCTCCTTCTTGGCTCACCCTGAGTTCCAATCACTCCTTCGACAAGCTGAAGAAGAATTCGGTTACGATCACGAAATGGGCCTCACTATTCCTTGTGATGAAGTTGTCTTCAGGTCTCTAACATCCTCCTTAAGATGA 318 0.4497 MAIRKSNKLPQHAVVLKQILKRCSSLGKKNGYDDDGHPVDVPKGHFAVYVGENRRRYIVPISFLAHPEFQSLLRQAEEEFGYDHEMGLTIPCDEVVFRSLTSSLR* 106
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso12g0298 105 Pfam Auxin responsive protein 28 104 IPR003676 GO:0009733
Gso12g0298 105 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 6 105 IPR003676 GO:0009733
Gso12g0298 105 PANTHER AUXIN-INDUCED PROTEIN 15A-LIKE 6 105 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso12g0298 Gso-Chr12 2631741 2632549 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso12g0298 20 100 Calmodulin-binding Proteins AT3G43120 48.148 3.92e-21 80.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso12g0298 K14488 - gmx:100500265 217.238