Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso12g0297 ATGACCAACAGCTCATCTTCGACAAAGCACGGTCAAGATCAGCCTGAATTAAGTGGTCCTACCCCCAAATCACAGCGAACCAAAATGGGCAAATCCGAAGACAACGATAAGAAGAACTTAGGTAAGAAACTCAAAGATGTGGAAATAAGCATTCCAATAGTATATGGGAACGTAGCATTTTGGCTTGGCAAAAAGGCTAGCGAGTATCAGTCGCACAAATGGACAGTATATGTTCGTGGAGCTACCAATGAGGATCTTGGGACGATAATAAAGCATGCTGTTTTTCAGTTGCATTCTAGTTTCAATAATCCCACACGTGTTGTGGAGTCACCGCCTTTTGAATTGTCAGAGTCAGGATGGGGGGAATTTGAAGTTTCCATCACACTTTATTTCCACAGTGATGTTTGTGACAAGCCTTTGAACTTATATCATCACTTGAAGTTGTATCCAGAGGATGAAAACAGTTCCATGTCCACAAAGAAGCCTGTTGTTGTGGAGTTTTATGATGAGATAGTTTTCCCTGATCCTTCTGAGGCTTTTTTAGCTCGTGTGCAAAATCATCCAGCTGTGAACTTGCCAAGATTACCTGCTGGACTCACCTTGCCTCCTTCCATACCTGTTGAGGATGCAAGTAAAAGGAGGAAAGGTGATACCAAAGATCATTCCTTAAGTCAATGGTTCATGAATTTCTCGGAAGCGGATGAGCTCTTACAGCTTGCAGCAGCTCGTCAGCAGGTTCAAGCTCATATTGCTAAACTCAGACGACAGATAAGCTTGATAGATGGACAGCATCAGCAGTTTAAATCTTCTTCTGACCTGTAG 822 0.427 MTNSSSSTKHGQDQPELSGPTPKSQRTKMGKSEDNDKKNLGKKLKDVEISIPIVYGNVAFWLGKKASEYQSHKWTVYVRGATNEDLGTIIKHAVFQLHSSFNNPTRVVESPPFELSESGWGEFEVSITLYFHSDVCDKPLNLYHHLKLYPEDENSSMSTKKPVVVEFYDEIVFPDPSEAFLARVQNHPAVNLPRLPAGLTLPPSIPVEDASKRRKGDTKDHSLSQWFMNFSEADELLQLAAARQQVQAHIAKLRRQISLIDGQHQQFKSSSDL* 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso12g0297 273 Coils Coil 236 256 - -
Gso12g0297 273 Pfam YEATS family 71 150 IPR005033 GO:0006355
Gso12g0297 273 MobiDBLite consensus disorder prediction 1 26 - -
Gso12g0297 273 PANTHER YEATS DOMAIN 16 270 IPR005033 GO:0006355
Gso12g0297 273 PANTHER TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 14B 16 270 - -
Gso12g0297 273 CDD YEATS_TFIID14_like 49 180 - -
Gso12g0297 273 Gene3D YEATS domain 44 196 IPR038704 -
Gso12g0297 273 ProSiteProfiles YEATS domain profile. 43 187 IPR005033 GO:0006355
Gso12g0297 273 MobiDBLite consensus disorder prediction 1 39 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso12g0297 Gso-Chr12 2622790 2626019 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso12g0297 K11341 - gmx:100790602 542.732