Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso12g0293 ATGGGTTTCCGTTTACCTGGTATCAGAAAGGCATTATTTGCAGCCAATCAAGCATCTTCAAAAGCAGTGGATGCTCCAAAGGGCTACCTTGCAGTGTATGTTGGAGAGAAAATGAAGCGGTTTGTGATCCCCGTGTTATACTTGAACCAACCTTCATTTCAAGACTTGTTGAGTCATGCTGAGGAAGAGTTTGGATATGAGCATCCCATGGGTGGCCTCACAATTCCTTGCAGCGAAGATGTCTTCCAACGTATAACTTCTTGCTTGAATGGACAATAA 279 0.4373 MGFRLPGIRKALFAANQASSKAVDAPKGYLAVYVGEKMKRFVIPVLYLNQPSFQDLLSHAEEEFGYEHPMGGLTIPCSEDVFQRITSCLNGQ* 93
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso12g0293 92 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 1 91 IPR003676 GO:0009733
Gso12g0293 92 Pfam Auxin responsive protein 16 89 IPR003676 GO:0009733
Gso12g0293 92 PANTHER AUXIN-INDUCED PROTEIN 6B 1 91 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso12g0293 Gso-Chr12 2607130 2607655 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso12g0293 17 92 Calmodulin-binding Proteins AT3G43120 44.737 4.59e-19 74.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso12g0293 K14488 - gmx:100820621 177.563